Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF440Q8IYI8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF440Q8IYI8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 NUS1P1-201ENST00000446295 882 ntBASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 AC073592.4-201ENST00000623827 446 ntBASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 GPR89P-201ENST00000407924 1495 ntBASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF440Q8IYI8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 MIR3652-201ENST00000579335 131 ntBASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 AC138894.3-201ENST00000603787 634 ntBASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 AD000864.1-201ENST00000624076 2295 ntBASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF440Q8IYI8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 AC079776.2-201ENST00000641154 1609 ntBASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF440Q8IYI8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms