Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB5BP61020 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAB5BP61020 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 TFP1-202ENST00000475455 1573 ntBASIC13.54□□□□□ -0.24
RAB5BP61020 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB5BP61020 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAB5BP61020 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB5BP61020 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.54□□□□□ -0.24
RAB5BP61020 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 AL356441.2-201ENST00000443009 864 ntBASIC13.54□□□□□ -0.24
RAB5BP61020 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.54□□□□□ -0.24
RAB5BP61020 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 AC008764.7-201ENST00000593779 1081 ntBASIC13.54□□□□□ -0.24
RAB5BP61020 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB5BP61020 AC104187.1-201ENST00000607510 612 ntBASIC13.54□□□□□ -0.24
RAB5BP61020 AL354811.1-201ENST00000610286 706 ntBASIC13.54□□□□□ -0.24
RAB5BP61020 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.54□□□□□ -0.24
RAB5BP61020 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAB5BP61020 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB5BP61020 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RAB5BP61020 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RAB5BP61020 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RAB5BP61020 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAB5BP61020 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
RAB5BP61020 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 AC023157.3-201ENST00000619086 2088 ntBASIC13.54□□□□□ -0.24
RAB5BP61020 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAB5BP61020 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB5BP61020 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RAB5BP61020 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB5BP61020 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RAB5BP61020 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB5BP61020 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 AL357033.4-201ENST00000617703 1807 ntBASIC13.53□□□□□ -0.24
RAB5BP61020 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB5BP61020 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.53□□□□□ -0.24
RAB5BP61020 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB5BP61020 AC007686.3-201ENST00000619017 3487 ntBASIC13.53□□□□□ -0.24
RAB5BP61020 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB5BP61020 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB5BP61020 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB5BP61020 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RAB5BP61020 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
RAB5BP61020 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.53□□□□□ -0.24
RAB5BP61020 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB5BP61020 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB5BP61020 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB5BP61020 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RAB5BP61020 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RAB5BP61020 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
RAB5BP61020 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB5BP61020 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RAB5BP61020 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB5BP61020 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RAB5BP61020 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms