Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN12P56749 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN12P56749 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CLDN12P56749 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CLDN12P56749 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN12P56749 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN12P56749 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLDN12P56749 GCSHP5-201ENST00000443090 522 ntBASIC15.09■□□□□ 0.01
CLDN12P56749 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN12P56749 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN12P56749 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN12P56749 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLDN12P56749 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN12P56749 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN12P56749 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN12P56749 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN12P56749 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN12P56749 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLDN12P56749 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.09■□□□□ 0.01
CLDN12P56749 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLDN12P56749 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN12P56749 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN12P56749 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN12P56749 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN12P56749 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
CLDN12P56749 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.09■□□□□ 0.01
CLDN12P56749 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
CLDN12P56749 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN12P56749 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN12P56749 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN12P56749 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.08■□□□□ 0.01
CLDN12P56749 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN12P56749 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLDN12P56749 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.08■□□□□ 0
CLDN12P56749 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CLDN12P56749 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.08■□□□□ 0
CLDN12P56749 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.08■□□□□ 0
CLDN12P56749 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CLDN12P56749 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.08■□□□□ 0
CLDN12P56749 EGLN1P1-201ENST00000531623 762 ntBASIC15.08■□□□□ 0
CLDN12P56749 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CLDN12P56749 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.08■□□□□ 0
CLDN12P56749 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.08■□□□□ 0
CLDN12P56749 AC004263.2-201ENST00000617183 678 ntBASIC15.08■□□□□ 0
CLDN12P56749 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.08■□□□□ 0
CLDN12P56749 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.08■□□□□ 0
CLDN12P56749 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLDN12P56749 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.08■□□□□ 0
CLDN12P56749 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.08■□□□□ 0
CLDN12P56749 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CLDN12P56749 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.08■□□□□ 0
CLDN12P56749 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.08■□□□□ 0
CLDN12P56749 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CLDN12P56749 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN12P56749 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.07■□□□□ 0
CLDN12P56749 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.07■□□□□ 0
CLDN12P56749 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.07■□□□□ 0
CLDN12P56749 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN12P56749 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CLDN12P56749 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN12P56749 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN12P56749 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLDN12P56749 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.07■□□□□ 0
CLDN12P56749 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CLDN12P56749 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.07■□□□□ 0
CLDN12P56749 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLDN12P56749 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms