Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP8P40818 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP8P40818 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
USP8P40818 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP8P40818 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP8P40818 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
USP8P40818 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
USP8P40818 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP8P40818 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
USP8P40818 COX5BP2-201ENST00000392354 334 ntBASIC18.89■□□□□ 0.61
USP8P40818 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP8P40818 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP8P40818 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.89■□□□□ 0.61
USP8P40818 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.89■□□□□ 0.61
USP8P40818 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
USP8P40818 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
USP8P40818 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP8P40818 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
USP8P40818 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.89■□□□□ 0.61
USP8P40818 AP000550.4-202ENST00000639755 178 ntBASIC18.89■□□□□ 0.61
USP8P40818 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP8P40818 LYSMD4-203ENST00000378904 2122 ntBASIC18.89■□□□□ 0.61
USP8P40818 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP8P40818 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
USP8P40818 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.89■□□□□ 0.61
USP8P40818 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.89■□□□□ 0.61
USP8P40818 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP8P40818 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP8P40818 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
USP8P40818 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP8P40818 AL118508.1-201ENST00000613502 2345 ntBASIC18.89■□□□□ 0.61
USP8P40818 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP8P40818 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.88■□□□□ 0.61
USP8P40818 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.88■□□□□ 0.61
USP8P40818 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.88■□□□□ 0.61
USP8P40818 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.88■□□□□ 0.61
USP8P40818 AP002414.4-201ENST00000589764 1148 ntBASIC18.88■□□□□ 0.61
USP8P40818 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
USP8P40818 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.88■□□□□ 0.61
USP8P40818 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.88■□□□□ 0.61
USP8P40818 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
USP8P40818 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
USP8P40818 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.88■□□□□ 0.61
USP8P40818 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.88■□□□□ 0.61
USP8P40818 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
USP8P40818 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
USP8P40818 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP8P40818 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
USP8P40818 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
USP8P40818 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
USP8P40818 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
USP8P40818 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.87■□□□□ 0.61
USP8P40818 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
USP8P40818 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
USP8P40818 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
USP8P40818 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.87■□□□□ 0.61
USP8P40818 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.87■□□□□ 0.61
USP8P40818 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.87■□□□□ 0.61
USP8P40818 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.87■□□□□ 0.61
USP8P40818 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.87■□□□□ 0.61
USP8P40818 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP8P40818 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.87■□□□□ 0.61
USP8P40818 AL138831.2-201ENST00000606564 490 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms