Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.25■□□□□ 0.03
THBS4P35443 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 AL160237.2-201ENST00000556165 472 ntBASIC15.25■□□□□ 0.03
THBS4P35443 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.25■□□□□ 0.03
THBS4P35443 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.25■□□□□ 0.03
THBS4P35443 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.25■□□□□ 0.03
THBS4P35443 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
THBS4P35443 AC104692.2-201ENST00000603054 253 ntBASIC15.25■□□□□ 0.03
THBS4P35443 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.25■□□□□ 0.03
THBS4P35443 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.25■□□□□ 0.03
THBS4P35443 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
THBS4P35443 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
THBS4P35443 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.25■□□□□ 0.03
THBS4P35443 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
THBS4P35443 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.25■□□□□ 0.03
THBS4P35443 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
THBS4P35443 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.25■□□□□ 0.03
THBS4P35443 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 AD000864.1-201ENST00000624076 2295 ntBASIC15.24■□□□□ 0.03
THBS4P35443 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
THBS4P35443 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS4P35443 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
THBS4P35443 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.24■□□□□ 0.03
THBS4P35443 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
THBS4P35443 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS4P35443 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.24■□□□□ 0.03
THBS4P35443 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
THBS4P35443 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.24■□□□□ 0.03
THBS4P35443 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.24■□□□□ 0.03
THBS4P35443 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS4P35443 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS4P35443 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.24■□□□□ 0.03
THBS4P35443 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
THBS4P35443 AC008608.2-201ENST00000606089 416 ntBASIC15.24■□□□□ 0.03
THBS4P35443 AP001269.4-201ENST00000609611 512 ntBASIC15.24■□□□□ 0.03
THBS4P35443 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS4P35443 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS4P35443 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
THBS4P35443 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 KRT8P10-201ENST00000450021 1447 ntBASIC15.24■□□□□ 0.03
THBS4P35443 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS4P35443 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
THBS4P35443 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS4P35443 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS4P35443 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS4P35443 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS4P35443 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
THBS4P35443 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS4P35443 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.23■□□□□ 0.03
THBS4P35443 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.23■□□□□ 0.03
THBS4P35443 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.23■□□□□ 0.03
THBS4P35443 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS4P35443 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS4P35443 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THBS4P35443 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.23■□□□□ 0.03
THBS4P35443 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
THBS4P35443 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS4P35443 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.23■□□□□ 0.03
THBS4P35443 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.23■□□□□ 0.03
THBS4P35443 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
THBS4P35443 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.23■□□□□ 0.03
THBS4P35443 ABCD1P5-201ENST00000445663 754 ntBASIC15.23■□□□□ 0.03
THBS4P35443 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.23■□□□□ 0.03
THBS4P35443 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.23■□□□□ 0.03
THBS4P35443 MTDHP3-201ENST00000594186 672 ntBASIC15.23■□□□□ 0.03
THBS4P35443 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS4P35443 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THBS4P35443 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.23■□□□□ 0.03
THBS4P35443 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS4P35443 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
THBS4P35443 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
THBS4P35443 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS4P35443 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THBS4P35443 LYSMD4-203ENST00000378904 2122 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms