Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHRNA3P32297 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRNA3P32297 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRNA3P32297 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CHRNA3P32297 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRNA3P32297 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHRNA3P32297 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRNA3P32297 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRNA3P32297 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.26■□□□□ 0.51
CHRNA3P32297 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CHRNA3P32297 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CHRNA3P32297 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRNA3P32297 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.26■□□□□ 0.51
CHRNA3P32297 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.26■□□□□ 0.51
CHRNA3P32297 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.26■□□□□ 0.51
CHRNA3P32297 AC099336.1-202ENST00000602961 463 ntBASIC18.26■□□□□ 0.51
CHRNA3P32297 AL353801.3-201ENST00000609898 542 ntBASIC18.26■□□□□ 0.51
CHRNA3P32297 AL121772.3-201ENST00000610840 674 ntBASIC18.26■□□□□ 0.51
CHRNA3P32297 AL139327.4-201ENST00000612362 153 ntBASIC18.26■□□□□ 0.51
CHRNA3P32297 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.26■□□□□ 0.51
CHRNA3P32297 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRNA3P32297 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRNA3P32297 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.26■□□□□ 0.51
CHRNA3P32297 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.26■□□□□ 0.51
CHRNA3P32297 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CHRNA3P32297 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.26■□□□□ 0.51
CHRNA3P32297 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHRNA3P32297 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.26■□□□□ 0.51
CHRNA3P32297 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRNA3P32297 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRNA3P32297 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRNA3P32297 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CHRNA3P32297 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.26■□□□□ 0.51
CHRNA3P32297 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.25■□□□□ 0.51
CHRNA3P32297 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
CHRNA3P32297 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CHRNA3P32297 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CHRNA3P32297 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 NSUN5P1-202ENST00000421140 1535 ntBASIC18.25■□□□□ 0.51
CHRNA3P32297 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.25■□□□□ 0.51
CHRNA3P32297 NSUN5P2-203ENST00000457352 1529 ntBASIC18.25■□□□□ 0.51
CHRNA3P32297 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.25■□□□□ 0.51
CHRNA3P32297 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.25■□□□□ 0.51
CHRNA3P32297 TSPY19P-201ENST00000418461 509 ntBASIC18.25■□□□□ 0.51
CHRNA3P32297 TSPY18P-201ENST00000441642 509 ntBASIC18.25■□□□□ 0.51
CHRNA3P32297 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.25■□□□□ 0.51
CHRNA3P32297 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CHRNA3P32297 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CHRNA3P32297 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CHRNA3P32297 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.25■□□□□ 0.51
CHRNA3P32297 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHRNA3P32297 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.24■□□□□ 0.51
CHRNA3P32297 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.24■□□□□ 0.51
CHRNA3P32297 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.24■□□□□ 0.51
CHRNA3P32297 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CHRNA3P32297 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.24■□□□□ 0.51
CHRNA3P32297 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 TPM4P1-201ENST00000436100 807 ntBASIC18.24■□□□□ 0.51
CHRNA3P32297 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CHRNA3P32297 AC091304.2-201ENST00000564639 760 ntBASIC18.24■□□□□ 0.51
CHRNA3P32297 AC111152.3-201ENST00000569699 673 ntBASIC18.24■□□□□ 0.51
CHRNA3P32297 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 AC138894.3-201ENST00000603787 634 ntBASIC18.24■□□□□ 0.51
CHRNA3P32297 AL732292.2-201ENST00000609649 430 ntBASIC18.24■□□□□ 0.51
CHRNA3P32297 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.24■□□□□ 0.51
CHRNA3P32297 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CHRNA3P32297 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CHRNA3P32297 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA3P32297 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms