Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.59■□□□□ 0.57
CD58P19256 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.59■□□□□ 0.57
CD58P19256 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.59■□□□□ 0.57
CD58P19256 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.59■□□□□ 0.57
CD58P19256 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CD58P19256 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CD58P19256 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.59■□□□□ 0.57
CD58P19256 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CD58P19256 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CD58P19256 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.59■□□□□ 0.57
CD58P19256 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CD58P19256 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD58P19256 AL121894.2-201ENST00000602977 491 ntBASIC18.59■□□□□ 0.57
CD58P19256 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.59■□□□□ 0.57
CD58P19256 AL031008.1-201ENST00000619963 541 ntBASIC18.59■□□□□ 0.57
CD58P19256 AL139288.1-201ENST00000623748 933 ntBASIC18.59■□□□□ 0.57
CD58P19256 TP73-AS1-207ENST00000624167 988 ntBASIC18.59■□□□□ 0.57
CD58P19256 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.59■□□□□ 0.57
CD58P19256 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.59■□□□□ 0.57
CD58P19256 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD58P19256 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD58P19256 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD58P19256 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.59■□□□□ 0.57
CD58P19256 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD58P19256 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD58P19256 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD58P19256 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD58P19256 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD58P19256 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CD58P19256 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CD58P19256 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.58■□□□□ 0.57
CD58P19256 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD58P19256 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD58P19256 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD58P19256 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD58P19256 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CD58P19256 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CD58P19256 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CD58P19256 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD58P19256 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD58P19256 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.58■□□□□ 0.56
CD58P19256 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD58P19256 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD58P19256 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CD58P19256 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD58P19256 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.58■□□□□ 0.56
CD58P19256 SCARNA2-201ENST00000458748 420 ntBASIC18.58■□□□□ 0.56
CD58P19256 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CD58P19256 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.58■□□□□ 0.56
CD58P19256 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.58■□□□□ 0.56
CD58P19256 AL121912.1-201ENST00000603683 238 ntBASIC18.58■□□□□ 0.56
CD58P19256 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.58■□□□□ 0.56
CD58P19256 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CD58P19256 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.58■□□□□ 0.56
CD58P19256 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD58P19256 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CD58P19256 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD58P19256 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD58P19256 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.58■□□□□ 0.56
CD58P19256 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CD58P19256 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD58P19256 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD58P19256 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD58P19256 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.57■□□□□ 0.56
CD58P19256 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD58P19256 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD58P19256 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD58P19256 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.57■□□□□ 0.56
CD58P19256 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD58P19256 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD58P19256 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.57■□□□□ 0.56
CD58P19256 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.57■□□□□ 0.56
CD58P19256 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.57■□□□□ 0.56
CD58P19256 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.57■□□□□ 0.56
CD58P19256 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.57■□□□□ 0.56
CD58P19256 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.57■□□□□ 0.56
CD58P19256 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.57■□□□□ 0.56
CD58P19256 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.57■□□□□ 0.56
CD58P19256 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.57■□□□□ 0.56
CD58P19256 AL022326.1-202ENST00000641533 845 ntBASIC18.57■□□□□ 0.56
CD58P19256 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.57■□□□□ 0.56
CD58P19256 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD58P19256 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD58P19256 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.57■□□□□ 0.56
CD58P19256 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD58P19256 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
CD58P19256 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD58P19256 AC097637.2-201ENST00000624096 1997 ntBASIC18.57■□□□□ 0.56
CD58P19256 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.57■□□□□ 0.56
CD58P19256 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
CD58P19256 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CD58P19256 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.56■□□□□ 0.56
CD58P19256 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD58P19256 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD58P19256 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD58P19256 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.56■□□□□ 0.56
CD58P19256 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD58P19256 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.56■□□□□ 0.56
CD58P19256 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CD58P19256 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms