Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMPD1P17405 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SMPD1P17405 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMPD1P17405 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMPD1P17405 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SMPD1P17405 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMPD1P17405 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMPD1P17405 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.1■□□□□ 0.65
SMPD1P17405 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.1■□□□□ 0.65
SMPD1P17405 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMPD1P17405 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMPD1P17405 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMPD1P17405 AL354751.1-201ENST00000412768 1863 ntBASIC19.1■□□□□ 0.65
SMPD1P17405 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SMPD1P17405 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMPD1P17405 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SMPD1P17405 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMPD1P17405 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.1■□□□□ 0.65
SMPD1P17405 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.1■□□□□ 0.65
SMPD1P17405 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.1■□□□□ 0.65
SMPD1P17405 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SMPD1P17405 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.1■□□□□ 0.65
SMPD1P17405 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.1■□□□□ 0.65
SMPD1P17405 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMPD1P17405 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMPD1P17405 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.1■□□□□ 0.65
SMPD1P17405 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMPD1P17405 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMPD1P17405 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.1■□□□□ 0.65
SMPD1P17405 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMPD1P17405 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SMPD1P17405 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMPD1P17405 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.1■□□□□ 0.65
SMPD1P17405 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SMPD1P17405 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 AKAP8P1-201ENST00000434743 1349 ntBASIC19.09■□□□□ 0.65
SMPD1P17405 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.09■□□□□ 0.65
SMPD1P17405 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.09■□□□□ 0.65
SMPD1P17405 KRT18P32-201ENST00000424695 1287 ntBASIC19.09■□□□□ 0.65
SMPD1P17405 GPS2P2-201ENST00000430745 888 ntBASIC19.09■□□□□ 0.65
SMPD1P17405 SPCS2P4-201ENST00000436160 681 ntBASIC19.09■□□□□ 0.65
SMPD1P17405 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.09■□□□□ 0.65
SMPD1P17405 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.09■□□□□ 0.65
SMPD1P17405 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.09■□□□□ 0.65
SMPD1P17405 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.09■□□□□ 0.65
SMPD1P17405 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.09■□□□□ 0.65
SMPD1P17405 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMPD1P17405 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SMPD1P17405 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMPD1P17405 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMPD1P17405 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.08■□□□□ 0.65
SMPD1P17405 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SMPD1P17405 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMPD1P17405 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMPD1P17405 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMPD1P17405 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.08■□□□□ 0.65
SMPD1P17405 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SMPD1P17405 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMPD1P17405 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.08■□□□□ 0.64
SMPD1P17405 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.08■□□□□ 0.64
SMPD1P17405 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SMPD1P17405 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.08■□□□□ 0.64
SMPD1P17405 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.08■□□□□ 0.64
SMPD1P17405 AL009183.1-201ENST00000603760 355 ntBASIC19.08■□□□□ 0.64
SMPD1P17405 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.08■□□□□ 0.64
SMPD1P17405 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.08■□□□□ 0.64
SMPD1P17405 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMPD1P17405 AC012569.1-201ENST00000591191 1524 ntBASIC19.08■□□□□ 0.64
SMPD1P17405 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
SMPD1P17405 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMPD1P17405 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMPD1P17405 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.08■□□□□ 0.64
SMPD1P17405 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMPD1P17405 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SMPD1P17405 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SMPD1P17405 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMPD1P17405 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.07■□□□□ 0.64
SMPD1P17405 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SMPD1P17405 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SMPD1P17405 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.07■□□□□ 0.64
SMPD1P17405 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SMPD1P17405 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.07■□□□□ 0.64
SMPD1P17405 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms