Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN2P05204 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN2P05204 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.18■□□□□ 0.18
HMGN2P05204 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HMGN2P05204 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGN2P05204 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HMGN2P05204 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
HMGN2P05204 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGN2P05204 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HMGN2P05204 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGN2P05204 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
HMGN2P05204 NUS1P2-201ENST00000417358 873 ntBASIC16.17■□□□□ 0.18
HMGN2P05204 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGN2P05204 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGN2P05204 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGN2P05204 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.17■□□□□ 0.18
HMGN2P05204 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGN2P05204 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGN2P05204 MIR5100-201ENST00000579544 119 ntBASIC16.17■□□□□ 0.18
HMGN2P05204 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.17■□□□□ 0.18
HMGN2P05204 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGN2P05204 AP000867.4-201ENST00000641616 219 ntBASIC16.17■□□□□ 0.18
HMGN2P05204 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.17■□□□□ 0.18
HMGN2P05204 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
HMGN2P05204 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGN2P05204 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGN2P05204 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HMGN2P05204 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN2P05204 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HMGN2P05204 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGN2P05204 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HMGN2P05204 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HMGN2P05204 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HMGN2P05204 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
HMGN2P05204 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HMGN2P05204 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HMGN2P05204 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGN2P05204 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
HMGN2P05204 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 UPK3BP1-201ENST00000428678 509 ntBASIC16.16■□□□□ 0.18
HMGN2P05204 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.16■□□□□ 0.18
HMGN2P05204 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
HMGN2P05204 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.16■□□□□ 0.18
HMGN2P05204 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGN2P05204 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGN2P05204 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGN2P05204 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGN2P05204 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGN2P05204 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
HMGN2P05204 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HMGN2P05204 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN2P05204 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN2P05204 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGN2P05204 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HMGN2P05204 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN2P05204 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HMGN2P05204 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN2P05204 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN2P05204 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN2P05204 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN2P05204 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HMGN2P05204 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
HMGN2P05204 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGN2P05204 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGN2P05204 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms