Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LGI1O95970 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LGI1O95970 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LGI1O95970 IER3-202ENST00000376377 1350 ntBASIC16■□□□□ 0.15
LGI1O95970 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16■□□□□ 0.15
LGI1O95970 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
LGI1O95970 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16■□□□□ 0.15
LGI1O95970 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16■□□□□ 0.15
LGI1O95970 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 AC009533.2-201ENST00000543664 586 ntBASIC16■□□□□ 0.15
LGI1O95970 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16■□□□□ 0.15
LGI1O95970 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16■□□□□ 0.15
LGI1O95970 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LGI1O95970 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16■□□□□ 0.15
LGI1O95970 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LGI1O95970 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
LGI1O95970 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16■□□□□ 0.15
LGI1O95970 FLJ38576-201ENST00000623820 2459 ntBASIC16■□□□□ 0.15
LGI1O95970 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
LGI1O95970 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
LGI1O95970 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.99■□□□□ 0.15
LGI1O95970 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LGI1O95970 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.99■□□□□ 0.15
LGI1O95970 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
LGI1O95970 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.99■□□□□ 0.15
LGI1O95970 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.99■□□□□ 0.15
LGI1O95970 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
LGI1O95970 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.99■□□□□ 0.15
LGI1O95970 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.99■□□□□ 0.15
LGI1O95970 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LGI1O95970 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LGI1O95970 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.99■□□□□ 0.15
LGI1O95970 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.99■□□□□ 0.15
LGI1O95970 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
LGI1O95970 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LGI1O95970 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.99■□□□□ 0.15
LGI1O95970 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.99■□□□□ 0.15
LGI1O95970 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.98■□□□□ 0.15
LGI1O95970 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.98■□□□□ 0.15
LGI1O95970 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LGI1O95970 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LGI1O95970 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.98■□□□□ 0.15
LGI1O95970 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LGI1O95970 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.98■□□□□ 0.15
LGI1O95970 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.98■□□□□ 0.15
LGI1O95970 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LGI1O95970 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LGI1O95970 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LGI1O95970 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LGI1O95970 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LGI1O95970 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
LGI1O95970 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.98■□□□□ 0.15
LGI1O95970 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LGI1O95970 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.98■□□□□ 0.15
LGI1O95970 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LGI1O95970 EGFEM1P-202ENST00000431685 1563 ntBASIC15.98■□□□□ 0.15
LGI1O95970 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LGI1O95970 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.98■□□□□ 0.15
LGI1O95970 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.98■□□□□ 0.15
LGI1O95970 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LGI1O95970 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.98■□□□□ 0.15
LGI1O95970 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms