Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
RAPGEF3O95398 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC25.58■■□□□ 1.69
RAPGEF3O95398 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC25.58■■□□□ 1.69
RAPGEF3O95398 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF3O95398 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF3O95398 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF3O95398 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF3O95398 RPL37AP1-201ENST00000412502 279 ntBASIC25.58■■□□□ 1.69
RAPGEF3O95398 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC25.58■■□□□ 1.69
RAPGEF3O95398 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC25.58■■□□□ 1.69
RAPGEF3O95398 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
RAPGEF3O95398 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF3O95398 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC25.58■■□□□ 1.69
RAPGEF3O95398 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF3O95398 AC008494.3-201ENST00000606615 944 ntBASIC25.58■■□□□ 1.69
RAPGEF3O95398 RAB34-223ENST00000636154 730 ntTSL 2 BASIC25.58■■□□□ 1.69
RAPGEF3O95398 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF3O95398 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF3O95398 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF3O95398 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF3O95398 AL353732.1-201ENST00000569618 1459 ntBASIC25.58■■□□□ 1.69
RAPGEF3O95398 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF3O95398 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC25.58■■□□□ 1.68
RAPGEF3O95398 SLC22A20-204ENST00000530038 1673 ntBASIC25.58■■□□□ 1.68
RAPGEF3O95398 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
RAPGEF3O95398 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC25.58■■□□□ 1.68
RAPGEF3O95398 REXO1L6P-201ENST00000603433 1515 ntBASIC25.58■■□□□ 1.68
RAPGEF3O95398 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
RAPGEF3O95398 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
RAPGEF3O95398 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
RAPGEF3O95398 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF3O95398 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF3O95398 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
RAPGEF3O95398 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF3O95398 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF3O95398 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF3O95398 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF3O95398 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF3O95398 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC25.57■■□□□ 1.68
RAPGEF3O95398 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF3O95398 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC25.57■■□□□ 1.68
RAPGEF3O95398 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC25.57■■□□□ 1.68
RAPGEF3O95398 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC25.57■■□□□ 1.68
RAPGEF3O95398 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC25.57■■□□□ 1.68
RAPGEF3O95398 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC25.57■■□□□ 1.68
RAPGEF3O95398 SPTSSB-204ENST00000617024 1292 ntBASIC25.57■■□□□ 1.68
RAPGEF3O95398 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF3O95398 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
RAPGEF3O95398 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC25.57■■□□□ 1.68
RAPGEF3O95398 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF3O95398 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF3O95398 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF3O95398 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RAPGEF3O95398 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC25.56■■□□□ 1.68
RAPGEF3O95398 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RAPGEF3O95398 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC25.56■■□□□ 1.68
RAPGEF3O95398 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RAPGEF3O95398 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RAPGEF3O95398 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RAPGEF3O95398 DFFBP1-201ENST00000433250 979 ntBASIC25.56■■□□□ 1.68
RAPGEF3O95398 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC25.56■■□□□ 1.68
RAPGEF3O95398 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC25.56■■□□□ 1.68
RAPGEF3O95398 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC25.56■■□□□ 1.68
RAPGEF3O95398 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
RAPGEF3O95398 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RAPGEF3O95398 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
RAPGEF3O95398 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RAPGEF3O95398 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
RAPGEF3O95398 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC25.55■■□□□ 1.68
RAPGEF3O95398 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RAPGEF3O95398 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC25.55■■□□□ 1.68
RAPGEF3O95398 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
RAPGEF3O95398 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC25.55■■□□□ 1.68
RAPGEF3O95398 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RAPGEF3O95398 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC25.55■■□□□ 1.68
RAPGEF3O95398 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC25.55■■□□□ 1.68
RAPGEF3O95398 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC25.55■■□□□ 1.68
RAPGEF3O95398 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC25.55■■□□□ 1.68
RAPGEF3O95398 AL139327.4-201ENST00000612362 153 ntBASIC25.55■■□□□ 1.68
RAPGEF3O95398 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC25.55■■□□□ 1.68
RAPGEF3O95398 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RAPGEF3O95398 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC25.55■■□□□ 1.68
RAPGEF3O95398 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RAPGEF3O95398 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RAPGEF3O95398 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
RAPGEF3O95398 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
RAPGEF3O95398 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC25.54■■□□□ 1.68
RAPGEF3O95398 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RAPGEF3O95398 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RAPGEF3O95398 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
RAPGEF3O95398 FAM86MP-201ENST00000340703 885 ntBASIC25.54■■□□□ 1.68
RAPGEF3O95398 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC25.54■■□□□ 1.68
RAPGEF3O95398 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC25.54■■□□□ 1.68
RAPGEF3O95398 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC25.54■■□□□ 1.68
RAPGEF3O95398 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC25.54■■□□□ 1.68
RAPGEF3O95398 MIR3909-201ENST00000579518 119 ntBASIC25.54■■□□□ 1.68
RAPGEF3O95398 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC25.54■■□□□ 1.68
RAPGEF3O95398 APOC4-201ENST00000591600 348 ntTSL 3 BASIC25.54■■□□□ 1.68
RAPGEF3O95398 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RAPGEF3O95398 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms