Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 RBPMS2P1-201ENST00000437762 623 ntBASIC16.24■□□□□ 0.19
NTN3O00634 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NTN3O00634 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 IGHV3-62-201ENST00000520057 340 ntBASIC16.24■□□□□ 0.19
NTN3O00634 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.24■□□□□ 0.19
NTN3O00634 AC138761.1-201ENST00000584393 385 ntBASIC16.24■□□□□ 0.19
NTN3O00634 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.24■□□□□ 0.19
NTN3O00634 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NTN3O00634 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 AC012317.2-201ENST00000623305 2251 ntBASIC16.24■□□□□ 0.19
NTN3O00634 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NTN3O00634 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.24■□□□□ 0.19
NTN3O00634 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.24■□□□□ 0.19
NTN3O00634 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 AL355312.1-201ENST00000407115 2176 ntBASIC16.23■□□□□ 0.19
NTN3O00634 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NTN3O00634 AC087289.5-201ENST00000586076 3175 ntBASIC16.23■□□□□ 0.19
NTN3O00634 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.23■□□□□ 0.19
NTN3O00634 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.23■□□□□ 0.19
NTN3O00634 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NTN3O00634 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.23■□□□□ 0.19
NTN3O00634 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.23■□□□□ 0.19
NTN3O00634 PMS2P4-201ENST00000412466 1052 ntBASIC16.23■□□□□ 0.19
NTN3O00634 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.23■□□□□ 0.19
NTN3O00634 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
NTN3O00634 KLF2P3-201ENST00000451977 1087 ntBASIC16.23■□□□□ 0.19
NTN3O00634 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.23■□□□□ 0.19
NTN3O00634 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.23■□□□□ 0.19
NTN3O00634 AC093214.1-201ENST00000511688 1107 ntBASIC16.23■□□□□ 0.19
NTN3O00634 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.23■□□□□ 0.19
NTN3O00634 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
NTN3O00634 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.23■□□□□ 0.19
NTN3O00634 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.23■□□□□ 0.19
NTN3O00634 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.23■□□□□ 0.19
NTN3O00634 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NTN3O00634 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
NTN3O00634 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NTN3O00634 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.23■□□□□ 0.19
NTN3O00634 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NTN3O00634 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.22■□□□□ 0.19
NTN3O00634 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.22■□□□□ 0.19
NTN3O00634 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
NTN3O00634 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NTN3O00634 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.22■□□□□ 0.19
NTN3O00634 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.22■□□□□ 0.19
NTN3O00634 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.22■□□□□ 0.19
NTN3O00634 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NTN3O00634 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.22■□□□□ 0.19
NTN3O00634 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.22■□□□□ 0.19
NTN3O00634 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NTN3O00634 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.22■□□□□ 0.19
NTN3O00634 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.22■□□□□ 0.19
NTN3O00634 MIR3909-201ENST00000579518 119 ntBASIC16.22■□□□□ 0.19
NTN3O00634 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.22■□□□□ 0.19
NTN3O00634 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 AL354751.1-201ENST00000412768 1863 ntBASIC16.22■□□□□ 0.19
NTN3O00634 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NTN3O00634 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.22■□□□□ 0.19
NTN3O00634 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NTN3O00634 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms