Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
TLR4O00206 AC008764.6-201ENST00000595909 2069 ntBASIC17.14■□□□□ 0.33
TLR4O00206 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.14■□□□□ 0.33
TLR4O00206 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TLR4O00206 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.14■□□□□ 0.33
TLR4O00206 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TLR4O00206 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.14■□□□□ 0.33
TLR4O00206 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TLR4O00206 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.14■□□□□ 0.33
TLR4O00206 IGLL3P-201ENST00000412472 434 ntBASIC17.14■□□□□ 0.33
TLR4O00206 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.14■□□□□ 0.33
TLR4O00206 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.14■□□□□ 0.33
TLR4O00206 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.14■□□□□ 0.33
TLR4O00206 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
TLR4O00206 SNHG9-202ENST00000564014 471 ntBASIC17.14■□□□□ 0.33
TLR4O00206 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.14■□□□□ 0.33
TLR4O00206 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.14■□□□□ 0.33
TLR4O00206 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TLR4O00206 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TLR4O00206 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.14■□□□□ 0.33
TLR4O00206 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.13■□□□□ 0.33
TLR4O00206 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.13■□□□□ 0.33
TLR4O00206 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TLR4O00206 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TLR4O00206 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.13■□□□□ 0.33
TLR4O00206 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
TLR4O00206 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.13■□□□□ 0.33
TLR4O00206 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
TLR4O00206 MKNK2P1-201ENST00000437526 628 ntBASIC17.13■□□□□ 0.33
TLR4O00206 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.13■□□□□ 0.33
TLR4O00206 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.13■□□□□ 0.33
TLR4O00206 AC096734.2-201ENST00000562054 433 ntBASIC17.13■□□□□ 0.33
TLR4O00206 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 AL355385.1-201ENST00000606123 409 ntBASIC17.13■□□□□ 0.33
TLR4O00206 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TLR4O00206 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.13■□□□□ 0.33
TLR4O00206 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.13■□□□□ 0.33
TLR4O00206 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TLR4O00206 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TLR4O00206 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TLR4O00206 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR4O00206 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.12■□□□□ 0.33
TLR4O00206 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR4O00206 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR4O00206 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TLR4O00206 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR4O00206 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR4O00206 KRT18P55-202ENST00000578578 1546 ntBASIC17.12■□□□□ 0.33
TLR4O00206 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.12■□□□□ 0.33
TLR4O00206 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TLR4O00206 AC254562.1-201ENST00000417586 456 ntBASIC17.12■□□□□ 0.33
TLR4O00206 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.12■□□□□ 0.33
TLR4O00206 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.12■□□□□ 0.33
TLR4O00206 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.12■□□□□ 0.33
TLR4O00206 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.12■□□□□ 0.33
TLR4O00206 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TLR4O00206 AC004877.2-201ENST00000623941 599 ntBASIC17.12■□□□□ 0.33
TLR4O00206 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR4O00206 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR4O00206 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TLR4O00206 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TLR4O00206 KRT18P28-201ENST00000453838 1332 ntBASIC17.12■□□□□ 0.33
TLR4O00206 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TLR4O00206 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.12■□□□□ 0.33
TLR4O00206 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TLR4O00206 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms