Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 AC092919.2-201ENST00000623631 1645 ntBASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 AC002056.1-201ENST00000395613 760 ntBASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 AC005412.3-201ENST00000580309 715 ntBASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 AC138932.1-201ENST00000534164 6830 ntBASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 AL138688.1-201ENST00000624851 1594 ntBASIC15.11■□□□□ 0.01
MBD3L5A6NJ08 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 RNF165-205ENST00000588679 2904 ntBASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 AC027796.2-201ENST00000575326 344 ntBASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 MIR4515-201ENST00000584082 81 ntBASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
MBD3L5A6NJ08 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 AC140658.5-201ENST00000438532 169 ntBASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 METTL21AP1-201ENST00000438852 635 ntBASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 AL513210.1-201ENST00000629608 234 ntBASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 AL121761.2-201ENST00000598007 1648 ntBASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
MBD3L5A6NJ08 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms