Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.54■□□□□ 0.56
UBQLN1Q9UMX0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN1Q9UMX0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 PAWRP1-201ENST00000451083 565 ntBASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
UBQLN1Q9UMX0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 HCG4B-203ENST00000450128 991 ntBASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 AC023511.2-201ENST00000618803 211 ntBASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN1Q9UMX0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.52■□□□□ 0.55
UBQLN1Q9UMX0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
UBQLN1Q9UMX0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBQLN1Q9UMX0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 OR6D1P-202ENST00000641007 5290 ntBASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN1Q9UMX0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.5■□□□□ 0.55
UBQLN1Q9UMX0 AC040169.1-201ENST00000565382 521 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms