Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 AC040169.1-201ENST00000565382 521 ntBASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CPNE7Q9UBL6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 PI4KAP1-204ENST00000612579 1703 ntBASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 MRPL20P1-201ENST00000400819 433 ntBASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 GPALPP1-207ENST00000611650 899 ntBASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 AC006538.3-201ENST00000612495 578 ntBASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE7Q9UBL6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
CPNE7Q9UBL6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE7Q9UBL6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
CPNE7Q9UBL6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.77■□□□□ 0.27
CPNE7Q9UBL6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE7Q9UBL6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.77■□□□□ 0.27
CPNE7Q9UBL6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.77■□□□□ 0.27
CPNE7Q9UBL6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE7Q9UBL6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 KRT18P2-201ENST00000447938 1258 ntBASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 AC010654.1-201ENST00000615722 808 ntBASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CPNE7Q9UBL6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms