Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC004790.2-201ENST00000623588 572 ntBASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 NEFHP1-201ENST00000412845 2629 ntBASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CLCF1Q9UBD9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 CRYGEP-201ENST00000412192 528 ntBASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 AC010654.1-201ENST00000615722 808 ntBASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 GGTLC5P-201ENST00000617623 998 ntBASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCF1Q9UBD9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 MRPL20P1-201ENST00000400819 433 ntBASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 HCG4B-203ENST00000450128 991 ntBASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCF1Q9UBD9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCF1Q9UBD9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCF1Q9UBD9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCF1Q9UBD9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCF1Q9UBD9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCF1Q9UBD9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCF1Q9UBD9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCF1Q9UBD9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
CLCF1Q9UBD9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCF1Q9UBD9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCF1Q9UBD9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCF1Q9UBD9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCF1Q9UBD9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms