Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL20A1Q9P218 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 FAM58CP-201ENST00000435741 640 ntBASIC19.46■□□□□ 0.71
COL20A1Q9P218 AL513480.1-201ENST00000451731 511 ntBASIC19.46■□□□□ 0.71
COL20A1Q9P218 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 AL596442.2-201ENST00000610240 980 ntBASIC19.46■□□□□ 0.71
COL20A1Q9P218 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 AC091812.2-201ENST00000619081 385 ntBASIC19.46■□□□□ 0.71
COL20A1Q9P218 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 AC129492.6-201ENST00000611383 1305 ntBASIC19.46■□□□□ 0.71
COL20A1Q9P218 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL20A1Q9P218 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.46■□□□□ 0.71
COL20A1Q9P218 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
COL20A1Q9P218 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COL20A1Q9P218 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.45■□□□□ 0.7
COL20A1Q9P218 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 EGFEM1P-202ENST00000431685 1563 ntBASIC19.45■□□□□ 0.7
COL20A1Q9P218 AL138688.1-201ENST00000624851 1594 ntBASIC19.45■□□□□ 0.7
COL20A1Q9P218 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
COL20A1Q9P218 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
COL20A1Q9P218 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.45■□□□□ 0.7
COL20A1Q9P218 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
COL20A1Q9P218 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
COL20A1Q9P218 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.45■□□□□ 0.7
COL20A1Q9P218 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.45■□□□□ 0.7
COL20A1Q9P218 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.45■□□□□ 0.7
COL20A1Q9P218 AC092902.6-201ENST00000641783 218 ntBASIC19.45■□□□□ 0.7
COL20A1Q9P218 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
COL20A1Q9P218 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.45■□□□□ 0.7
COL20A1Q9P218 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COL20A1Q9P218 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL20A1Q9P218 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 AC116353.5-201ENST00000638148 1699 ntBASIC19.44■□□□□ 0.7
COL20A1Q9P218 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 AP002472.1-201ENST00000577490 586 ntBASIC19.44■□□□□ 0.7
COL20A1Q9P218 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 AC093525.9-201ENST00000624961 1746 ntBASIC19.44■□□□□ 0.7
COL20A1Q9P218 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL20A1Q9P218 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
COL20A1Q9P218 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms