Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.55■□□□□ 0.4
HACD3Q9P035 KRT18P56-201ENST00000507275 550 ntBASIC17.55■□□□□ 0.4
HACD3Q9P035 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.55■□□□□ 0.4
HACD3Q9P035 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.55■□□□□ 0.4
HACD3Q9P035 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.55■□□□□ 0.4
HACD3Q9P035 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.55■□□□□ 0.4
HACD3Q9P035 AC091304.2-201ENST00000564639 760 ntBASIC17.55■□□□□ 0.4
HACD3Q9P035 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.55■□□□□ 0.4
HACD3Q9P035 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.55■□□□□ 0.4
HACD3Q9P035 LINC01711-201ENST00000598340 967 ntBASIC17.55■□□□□ 0.4
HACD3Q9P035 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HACD3Q9P035 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.55■□□□□ 0.4
HACD3Q9P035 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HACD3Q9P035 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HACD3Q9P035 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HACD3Q9P035 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HACD3Q9P035 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HACD3Q9P035 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HACD3Q9P035 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HACD3Q9P035 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HACD3Q9P035 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HACD3Q9P035 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HACD3Q9P035 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HACD3Q9P035 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HACD3Q9P035 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.54■□□□□ 0.4
HACD3Q9P035 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HACD3Q9P035 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HACD3Q9P035 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HACD3Q9P035 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.54■□□□□ 0.4
HACD3Q9P035 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.54■□□□□ 0.4
HACD3Q9P035 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.54■□□□□ 0.4
HACD3Q9P035 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.54■□□□□ 0.4
HACD3Q9P035 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 CLEC4GP1-201ENST00000596555 870 ntBASIC17.54■□□□□ 0.4
HACD3Q9P035 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.54■□□□□ 0.4
HACD3Q9P035 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HACD3Q9P035 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.54■□□□□ 0.4
HACD3Q9P035 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HACD3Q9P035 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HACD3Q9P035 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 FER1L4-210ENST00000615531 5998 ntBASIC17.54■□□□□ 0.4
HACD3Q9P035 AC046185.3-201ENST00000623228 1824 ntBASIC17.54■□□□□ 0.4
HACD3Q9P035 AC132938.5-201ENST00000624980 1813 ntBASIC17.54■□□□□ 0.4
HACD3Q9P035 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
HACD3Q9P035 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HACD3Q9P035 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 AC009336.1-201ENST00000608941 1553 ntBASIC17.53■□□□□ 0.4
HACD3Q9P035 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.53■□□□□ 0.4
HACD3Q9P035 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.53■□□□□ 0.4
HACD3Q9P035 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.53■□□□□ 0.4
HACD3Q9P035 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.53■□□□□ 0.4
HACD3Q9P035 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.53■□□□□ 0.4
HACD3Q9P035 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.53■□□□□ 0.4
HACD3Q9P035 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.53■□□□□ 0.4
HACD3Q9P035 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.53■□□□□ 0.4
HACD3Q9P035 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.53■□□□□ 0.4
HACD3Q9P035 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.53■□□□□ 0.4
HACD3Q9P035 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.53■□□□□ 0.4
HACD3Q9P035 AC011270.2-201ENST00000624293 2550 ntBASIC17.53■□□□□ 0.4
HACD3Q9P035 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 AC108860.2-201ENST00000562760 2183 ntBASIC17.53■□□□□ 0.4
HACD3Q9P035 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HACD3Q9P035 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.52■□□□□ 0.4
HACD3Q9P035 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms