Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
SLC52A1Q9NWF4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
SLC52A1Q9NWF4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SLC52A1Q9NWF4 GNAS-203ENST00000306120 1878 ntBASIC24.54■■□□□ 1.52
SLC52A1Q9NWF4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SLC52A1Q9NWF4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC24.54■■□□□ 1.52
SLC52A1Q9NWF4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC24.54■■□□□ 1.52
SLC52A1Q9NWF4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SLC52A1Q9NWF4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
SLC52A1Q9NWF4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC24.54■■□□□ 1.52
SLC52A1Q9NWF4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SLC52A1Q9NWF4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SLC52A1Q9NWF4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SLC52A1Q9NWF4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
SLC52A1Q9NWF4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 GK-202ENST00000378941 458 ntTSL 3 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 CD81-202ENST00000381036 880 ntTSL 3 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 CRB3P1-201ENST00000449338 276 ntBASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 AC004890.2-204ENST00000481968 304 ntBASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 AC027307.2-201ENST00000591252 911 ntBASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
SLC52A1Q9NWF4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 AL512638.1-201ENST00000457493 794 ntBASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 AC091167.2-201ENST00000579581 588 ntBASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 AL031055.1-201ENST00000606362 631 ntBASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC24.52■■□□□ 1.52
SLC52A1Q9NWF4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 AP005018.1-201ENST00000525475 301 ntBASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC24.51■■□□□ 1.51
SLC52A1Q9NWF4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 SLC22A20-204ENST00000530038 1673 ntBASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SLC52A1Q9NWF4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC52A1Q9NWF4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms