Protein–RNA interactions for Protein: Q9NUS5

AP5S1, AP-5 complex subunit sigma-1, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP5S1Q9NUS5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 Z85996.1-201ENST00000494644 937 ntBASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 AC069544.1-201ENST00000609399 999 ntBASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 AC097376.2-205ENST00000610159 5334 ntBASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP5S1Q9NUS5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
AP5S1Q9NUS5 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
AP5S1Q9NUS5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.83□□□□□ -0.35
AP5S1Q9NUS5 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
AP5S1Q9NUS5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
AP5S1Q9NUS5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
AP5S1Q9NUS5 AL163051.1-201ENST00000569214 1512 ntBASIC12.83□□□□□ -0.35
AP5S1Q9NUS5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
AP5S1Q9NUS5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
AP5S1Q9NUS5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 KRT18P29-201ENST00000397031 1267 ntBASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 NBPF21P-201ENST00000425093 1451 ntBASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP5S1Q9NUS5 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms