Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 AC092647.4-201ENST00000457211 535 ntBASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 AL359075.1-203ENST00000462729 1002 ntBASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 AL139327.4-201ENST00000612362 153 ntBASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 AC005915.1-201ENST00000624912 2018 ntBASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.6■□□□□ 0.25
THUMPD3Q9BV44 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 PKD1P5-201ENST00000532415 10291 ntBASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 FLJ38576-201ENST00000623820 2459 ntBASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 KRT18P38-201ENST00000449496 1282 ntBASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 AC092597.1-201ENST00000487352 616 ntBASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD3Q9BV44 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms