Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 LINC00167-201ENST00000530583 1419 ntBASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 KRT8P9-201ENST00000558927 1449 ntBASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 AC083906.2-201ENST00000511578 360 ntBASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC22CQ9BRL7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 AC104581.4-201ENST00000623126 3052 ntBASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 AC080038.1-201ENST00000611274 1154 ntBASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SEC22CQ9BRL7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 MTDHP1-201ENST00000605323 784 ntBASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 AC130371.2-201ENST00000619443 611 ntBASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 AP002414.2-201ENST00000591780 3365 ntBASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 AC093525.9-201ENST00000624961 1746 ntBASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SEC22CQ9BRL7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms