Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 HCG11-201ENST00000411553 5696 ntBASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 CXCL1P1-201ENST00000502804 216 ntBASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 AC091812.2-201ENST00000619081 385 ntBASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 REXO1L11P-201ENST00000620964 1927 ntBASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNGAP1Q96PV0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 PCDHB18P-201ENST00000524813 2368 ntBASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNGAP1Q96PV0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SYNGAP1Q96PV0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms