Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 DUX4L26-201ENST00000489078 1255 ntBASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 AC139887.4-201ENST00000607877 719 ntBASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 AC004263.2-201ENST00000617183 678 ntBASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 AC006011.2-201ENST00000621313 1158 ntBASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 AC093525.9-201ENST00000624961 1746 ntBASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
FOXRED1Q96CU9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 AL391807.1-203ENST00000604392 2365 ntBASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 AC096633.1-201ENST00000422446 749 ntBASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 AC117947.1-201ENST00000427448 529 ntBASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 AL136038.4-201ENST00000603606 1261 ntBASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXRED1Q96CU9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 MIR1224-201ENST00000408193 85 ntBASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 AL023973.1-201ENST00000624619 620 ntBASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXRED1Q96CU9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms