Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNKSR1Q969H4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNKSR1Q969H4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNKSR1Q969H4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNKSR1Q969H4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CNKSR1Q969H4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNKSR1Q969H4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNKSR1Q969H4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNKSR1Q969H4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.02■□□□□ 0.96
CNKSR1Q969H4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.02■□□□□ 0.96
CNKSR1Q969H4 AC241585.1-201ENST00000433527 519 ntBASIC21.02■□□□□ 0.96
CNKSR1Q969H4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.02■□□□□ 0.96
CNKSR1Q969H4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.02■□□□□ 0.96
CNKSR1Q969H4 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.02■□□□□ 0.96
CNKSR1Q969H4 AL008721.1-201ENST00000609964 604 ntBASIC21.02■□□□□ 0.96
CNKSR1Q969H4 AC008267.7-201ENST00000624570 1194 ntBASIC21.02■□□□□ 0.96
CNKSR1Q969H4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CNKSR1Q969H4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CNKSR1Q969H4 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.02■□□□□ 0.95
CNKSR1Q969H4 WIZP1-201ENST00000531444 2299 ntBASIC21.02■□□□□ 0.95
CNKSR1Q969H4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.02■□□□□ 0.95
CNKSR1Q969H4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CNKSR1Q969H4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 OR8S1-201ENST00000310194 1080 ntBASIC21.01■□□□□ 0.95
CNKSR1Q969H4 PIN1P1-201ENST00000412108 996 ntBASIC21.01■□□□□ 0.95
CNKSR1Q969H4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 AC004890.2-204ENST00000481968 304 ntBASIC21.01■□□□□ 0.95
CNKSR1Q969H4 SERBP1P5-201ENST00000510079 1181 ntBASIC21.01■□□□□ 0.95
CNKSR1Q969H4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 GNAS-203ENST00000306120 1878 ntBASIC21.01■□□□□ 0.95
CNKSR1Q969H4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNKSR1Q969H4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21■□□□□ 0.95
CNKSR1Q969H4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNKSR1Q969H4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNKSR1Q969H4 FLJ13224-201ENST00000313737 1514 ntBASIC21■□□□□ 0.95
CNKSR1Q969H4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNKSR1Q969H4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNKSR1Q969H4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21■□□□□ 0.95
CNKSR1Q969H4 MEIS3P1-201ENST00000495167 958 ntBASIC21■□□□□ 0.95
CNKSR1Q969H4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNKSR1Q969H4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21■□□□□ 0.95
CNKSR1Q969H4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21■□□□□ 0.95
CNKSR1Q969H4 AP000842.3-202ENST00000569238 1080 ntBASIC21■□□□□ 0.95
CNKSR1Q969H4 SPDYE22P-201ENST00000582158 798 ntBASIC21■□□□□ 0.95
CNKSR1Q969H4 AC025048.6-201ENST00000634326 1161 ntBASIC21■□□□□ 0.95
CNKSR1Q969H4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CNKSR1Q969H4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21■□□□□ 0.95
CNKSR1Q969H4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21■□□□□ 0.95
CNKSR1Q969H4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CNKSR1Q969H4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21■□□□□ 0.95
CNKSR1Q969H4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21■□□□□ 0.95
CNKSR1Q969H4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21■□□□□ 0.95
CNKSR1Q969H4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21■□□□□ 0.95
CNKSR1Q969H4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 MIR346-201ENST00000362234 95 ntBASIC20.99■□□□□ 0.95
CNKSR1Q969H4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 AC007274.1-201ENST00000439805 662 ntBASIC20.99■□□□□ 0.95
CNKSR1Q969H4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 AC027307.2-201ENST00000591252 911 ntBASIC20.99■□□□□ 0.95
CNKSR1Q969H4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 AC009118.2-201ENST00000613275 655 ntBASIC20.99■□□□□ 0.95
CNKSR1Q969H4 AL662799.1-202ENST00000614205 422 ntBASIC20.99■□□□□ 0.95
CNKSR1Q969H4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNKSR1Q969H4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNKSR1Q969H4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms