Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM48Q8IWZ4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 STK25P1-201ENST00000585406 838 ntBASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 AC008735.5-201ENST00000623544 497 ntBASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 AC107918.4-202ENST00000641623 219 ntBASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 AC099398.1-201ENST00000567919 2776 ntBASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM48Q8IWZ4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 AC243591.1-201ENST00000452967 1364 ntBASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 AC092910.1-201ENST00000482027 1129 ntBASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 AC006557.2-201ENST00000592985 1240 ntBASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 MIR1199-201ENST00000621445 119 ntBASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
TRIM48Q8IWZ4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 PRYP5-201ENST00000451909 266 ntBASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 AC105339.3-201ENST00000560043 636 ntBASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 AC116407.3-201ENST00000623905 1129 ntBASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM48Q8IWZ4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM48Q8IWZ4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM48Q8IWZ4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM48Q8IWZ4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM48Q8IWZ4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms