Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
APLFQ8IW19 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APLFQ8IW19 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
APLFQ8IW19 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.25■□□□□ 0.35
APLFQ8IW19 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APLFQ8IW19 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.25■□□□□ 0.35
APLFQ8IW19 PVRIG2P-201ENST00000435460 978 ntBASIC17.25■□□□□ 0.35
APLFQ8IW19 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APLFQ8IW19 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.25■□□□□ 0.35
APLFQ8IW19 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.25■□□□□ 0.35
APLFQ8IW19 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.25■□□□□ 0.35
APLFQ8IW19 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.25■□□□□ 0.35
APLFQ8IW19 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APLFQ8IW19 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APLFQ8IW19 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APLFQ8IW19 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
APLFQ8IW19 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APLFQ8IW19 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.25■□□□□ 0.35
APLFQ8IW19 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
APLFQ8IW19 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APLFQ8IW19 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.25■□□□□ 0.35
APLFQ8IW19 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APLFQ8IW19 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.25■□□□□ 0.35
APLFQ8IW19 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.25■□□□□ 0.35
APLFQ8IW19 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
APLFQ8IW19 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
APLFQ8IW19 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
APLFQ8IW19 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.24■□□□□ 0.35
APLFQ8IW19 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.24■□□□□ 0.35
APLFQ8IW19 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.24■□□□□ 0.35
APLFQ8IW19 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
APLFQ8IW19 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
APLFQ8IW19 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.24■□□□□ 0.35
APLFQ8IW19 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.24■□□□□ 0.35
APLFQ8IW19 EMBP1-201ENST00000458200 901 ntBASIC17.24■□□□□ 0.35
APLFQ8IW19 TOB2P1-201ENST00000469761 992 ntBASIC17.24■□□□□ 0.35
APLFQ8IW19 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.24■□□□□ 0.35
APLFQ8IW19 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.24■□□□□ 0.35
APLFQ8IW19 AL160237.2-201ENST00000556165 472 ntBASIC17.24■□□□□ 0.35
APLFQ8IW19 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.24■□□□□ 0.35
APLFQ8IW19 MIR3180-4-201ENST00000582223 153 ntBASIC17.24■□□□□ 0.35
APLFQ8IW19 AC104692.2-201ENST00000603054 253 ntBASIC17.24■□□□□ 0.35
APLFQ8IW19 AL732292.2-201ENST00000609649 430 ntBASIC17.24■□□□□ 0.35
APLFQ8IW19 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
APLFQ8IW19 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
APLFQ8IW19 LINC00554-201ENST00000564841 3011 ntBASIC17.24■□□□□ 0.35
APLFQ8IW19 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
APLFQ8IW19 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
APLFQ8IW19 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APLFQ8IW19 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.24■□□□□ 0.35
APLFQ8IW19 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.23■□□□□ 0.35
APLFQ8IW19 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APLFQ8IW19 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APLFQ8IW19 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APLFQ8IW19 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
APLFQ8IW19 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APLFQ8IW19 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
APLFQ8IW19 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
APLFQ8IW19 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
APLFQ8IW19 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.23■□□□□ 0.35
APLFQ8IW19 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APLFQ8IW19 RCC2P3-201ENST00000418112 1537 ntBASIC17.23■□□□□ 0.35
APLFQ8IW19 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
APLFQ8IW19 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APLFQ8IW19 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
APLFQ8IW19 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
APLFQ8IW19 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.23■□□□□ 0.35
APLFQ8IW19 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.23■□□□□ 0.35
APLFQ8IW19 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
APLFQ8IW19 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.23■□□□□ 0.35
APLFQ8IW19 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
APLFQ8IW19 Z83836.1-201ENST00000624605 1642 ntBASIC17.23■□□□□ 0.35
APLFQ8IW19 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
APLFQ8IW19 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
APLFQ8IW19 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.23■□□□□ 0.35
APLFQ8IW19 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APLFQ8IW19 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.23■□□□□ 0.35
APLFQ8IW19 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
APLFQ8IW19 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APLFQ8IW19 KRT18P31-201ENST00000506277 1292 ntBASIC17.23■□□□□ 0.35
APLFQ8IW19 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.23■□□□□ 0.35
APLFQ8IW19 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
APLFQ8IW19 AGGF1P2-201ENST00000426656 2106 ntBASIC17.23■□□□□ 0.35
APLFQ8IW19 HEIH-201ENST00000623091 1652 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms