Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.13□□□□□ -0.31
MRPL54Q6P161 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 POM121L13P-201ENST00000422362 380 ntBASIC13.13□□□□□ -0.31
MRPL54Q6P161 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL54Q6P161 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
MRPL54Q6P161 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 AC004911.1-201ENST00000416316 871 ntBASIC13.12□□□□□ -0.31
MRPL54Q6P161 AC004951.3-201ENST00000418645 1148 ntBASIC13.12□□□□□ -0.31
MRPL54Q6P161 AC004980.1-204ENST00000429707 299 ntBASIC13.12□□□□□ -0.31
MRPL54Q6P161 KRT18P5-201ENST00000436075 1291 ntBASIC13.12□□□□□ -0.31
MRPL54Q6P161 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 AL445675.2-201ENST00000620291 557 ntBASIC13.12□□□□□ -0.31
MRPL54Q6P161 SBF1P1-201ENST00000444527 5631 ntBASIC13.12□□□□□ -0.31
MRPL54Q6P161 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL54Q6P161 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
MRPL54Q6P161 AC036111.1-201ENST00000533973 1582 ntBASIC13.11□□□□□ -0.31
MRPL54Q6P161 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.11□□□□□ -0.31
MRPL54Q6P161 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL54Q6P161 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms