Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 AC133963.1-201ENST00000504166 1679 ntBASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 AC142381.1-201ENST00000426099 345 ntBASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 OARD1-208ENST00000469104 704 ntTSL 2 BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 AC027307.2-201ENST00000591252 911 ntBASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 LINC02560-201ENST00000596379 459 ntBASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 LINC00895-201ENST00000629028 1637 ntBASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 TDG-209ENST00000544861 1387 ntTSL 2 BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 AC097493.3-201ENST00000509725 367 ntBASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDC42BPAQ5VT25 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 BASP1P1-201ENST00000430708 665 ntBASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC25.86■■□□□ 1.73
CDC42BPAQ5VT25 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 RAC2-204ENST00000406508 893 ntTSL 5 BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 TERF1P3-201ENST00000505638 1227 ntBASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC25.85■■□□□ 1.73
CDC42BPAQ5VT25 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 AC100757.3-201ENST00000622361 1406 ntBASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 AC012317.2-201ENST00000623305 2251 ntBASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 IGHV3-42-201ENST00000520410 361 ntBASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms