Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRA2BP62995 AC080080.1-201ENST00000625121 2420 ntBASIC16.34■□□□□ 0.21
TRA2BP62995 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRA2BP62995 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.34■□□□□ 0.21
TRA2BP62995 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRA2BP62995 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRA2BP62995 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRA2BP62995 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRA2BP62995 AC097637.2-201ENST00000624096 1997 ntBASIC16.33■□□□□ 0.21
TRA2BP62995 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRA2BP62995 FZD10-202ENST00000539839 3282 ntBASIC16.33■□□□□ 0.2
TRA2BP62995 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRA2BP62995 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRA2BP62995 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRA2BP62995 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRA2BP62995 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRA2BP62995 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.33■□□□□ 0.2
TRA2BP62995 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRA2BP62995 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.33■□□□□ 0.2
TRA2BP62995 AC091304.2-201ENST00000564639 760 ntBASIC16.33■□□□□ 0.2
TRA2BP62995 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.33■□□□□ 0.2
TRA2BP62995 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.33■□□□□ 0.2
TRA2BP62995 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.33■□□□□ 0.2
TRA2BP62995 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.33■□□□□ 0.2
TRA2BP62995 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRA2BP62995 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRA2BP62995 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRA2BP62995 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRA2BP62995 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRA2BP62995 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRA2BP62995 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRA2BP62995 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRA2BP62995 AC060834.1-201ENST00000443027 2032 ntBASIC16.33■□□□□ 0.2
TRA2BP62995 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.33■□□□□ 0.2
TRA2BP62995 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRA2BP62995 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRA2BP62995 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRA2BP62995 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRA2BP62995 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.32■□□□□ 0.2
TRA2BP62995 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.32■□□□□ 0.2
TRA2BP62995 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRA2BP62995 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRA2BP62995 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.32■□□□□ 0.2
TRA2BP62995 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.32■□□□□ 0.2
TRA2BP62995 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.32■□□□□ 0.2
TRA2BP62995 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.32■□□□□ 0.2
TRA2BP62995 LINC00982-205ENST00000420957 435 ntBASIC16.32■□□□□ 0.2
TRA2BP62995 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.32■□□□□ 0.2
TRA2BP62995 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRA2BP62995 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.32■□□□□ 0.2
TRA2BP62995 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
TRA2BP62995 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.32■□□□□ 0.2
TRA2BP62995 PRELID1P1-202ENST00000567272 903 ntBASIC16.32■□□□□ 0.2
TRA2BP62995 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.32■□□□□ 0.2
TRA2BP62995 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.32■□□□□ 0.2
TRA2BP62995 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
TRA2BP62995 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.32■□□□□ 0.2
TRA2BP62995 AL022326.1-202ENST00000641533 845 ntBASIC16.32■□□□□ 0.2
TRA2BP62995 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRA2BP62995 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.31■□□□□ 0.2
TRA2BP62995 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRA2BP62995 AC004817.3-201ENST00000602957 2129 ntBASIC16.31■□□□□ 0.2
TRA2BP62995 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
TRA2BP62995 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.31■□□□□ 0.2
TRA2BP62995 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.31■□□□□ 0.2
TRA2BP62995 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.31■□□□□ 0.2
TRA2BP62995 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRA2BP62995 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRA2BP62995 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRA2BP62995 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.31■□□□□ 0.2
TRA2BP62995 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.31■□□□□ 0.2
TRA2BP62995 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms