Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.39□□□□□ -0.43
UBE2D3P61077 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D3P61077 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
UBE2D3P61077 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D3P61077 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
UBE2D3P61077 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12.38□□□□□ -0.43
UBE2D3P61077 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
UBE2D3P61077 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D3P61077 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
UBE2D3P61077 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.38□□□□□ -0.43
UBE2D3P61077 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.38□□□□□ -0.43
UBE2D3P61077 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.38□□□□□ -0.43
UBE2D3P61077 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.38□□□□□ -0.43
UBE2D3P61077 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D3P61077 AC005521.1-201ENST00000393351 872 ntBASIC12.38□□□□□ -0.43
UBE2D3P61077 AC096633.1-201ENST00000422446 749 ntBASIC12.38□□□□□ -0.43
UBE2D3P61077 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D3P61077 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.38□□□□□ -0.43
UBE2D3P61077 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.38□□□□□ -0.43
UBE2D3P61077 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.38□□□□□ -0.43
UBE2D3P61077 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
UBE2D3P61077 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.38□□□□□ -0.43
UBE2D3P61077 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
UBE2D3P61077 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.38□□□□□ -0.43
UBE2D3P61077 PCDHB17P-201ENST00000539533 2393 ntBASIC12.38□□□□□ -0.43
UBE2D3P61077 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.38□□□□□ -0.43
UBE2D3P61077 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.38□□□□□ -0.43
UBE2D3P61077 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D3P61077 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D3P61077 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D3P61077 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
UBE2D3P61077 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
UBE2D3P61077 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D3P61077 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
UBE2D3P61077 LYSMD4-203ENST00000378904 2122 ntBASIC12.38□□□□□ -0.43
UBE2D3P61077 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D3P61077 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D3P61077 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D3P61077 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.38□□□□□ -0.43
UBE2D3P61077 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBE2D3P61077 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
UBE2D3P61077 AL136379.1-201ENST00000623471 2642 ntBASIC12.38□□□□□ -0.43
UBE2D3P61077 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
UBE2D3P61077 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.38□□□□□ -0.43
UBE2D3P61077 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.37□□□□□ -0.43
UBE2D3P61077 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.37□□□□□ -0.43
UBE2D3P61077 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.37□□□□□ -0.43
UBE2D3P61077 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBE2D3P61077 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
UBE2D3P61077 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.37□□□□□ -0.43
UBE2D3P61077 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.37□□□□□ -0.43
UBE2D3P61077 AC112907.2-201ENST00000448639 330 ntBASIC12.37□□□□□ -0.43
UBE2D3P61077 KRT18P38-201ENST00000449496 1282 ntBASIC12.37□□□□□ -0.43
UBE2D3P61077 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.37□□□□□ -0.43
UBE2D3P61077 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.37□□□□□ -0.43
UBE2D3P61077 AC005332.3-201ENST00000589904 676 ntBASIC12.37□□□□□ -0.43
UBE2D3P61077 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
UBE2D3P61077 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBE2D3P61077 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
UBE2D3P61077 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBE2D3P61077 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2D3P61077 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms