Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCR4P61073 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCR4P61073 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCR4P61073 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCR4P61073 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCR4P61073 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CXCR4P61073 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCR4P61073 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCR4P61073 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCR4P61073 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCR4P61073 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCR4P61073 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CXCR4P61073 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CXCR4P61073 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCR4P61073 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CXCR4P61073 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCR4P61073 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCR4P61073 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCR4P61073 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CXCR4P61073 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CXCR4P61073 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 PVRIG2P-201ENST00000435460 978 ntBASIC15.81■□□□□ 0.12
CXCR4P61073 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.81■□□□□ 0.12
CXCR4P61073 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.81■□□□□ 0.12
CXCR4P61073 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.81■□□□□ 0.12
CXCR4P61073 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 LINC00554-201ENST00000564841 3011 ntBASIC15.81■□□□□ 0.12
CXCR4P61073 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
CXCR4P61073 AL512604.3-201ENST00000569583 964 ntBASIC15.81■□□□□ 0.12
CXCR4P61073 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CXCR4P61073 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.81■□□□□ 0.12
CXCR4P61073 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.81■□□□□ 0.12
CXCR4P61073 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.81■□□□□ 0.12
CXCR4P61073 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.81■□□□□ 0.12
CXCR4P61073 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CXCR4P61073 AL662844.4-201ENST00000606367 2838 ntBASIC15.81■□□□□ 0.12
CXCR4P61073 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CXCR4P61073 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.8■□□□□ 0.12
CXCR4P61073 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CXCR4P61073 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CXCR4P61073 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.8■□□□□ 0.12
CXCR4P61073 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
CXCR4P61073 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.8■□□□□ 0.12
CXCR4P61073 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.8■□□□□ 0.12
CXCR4P61073 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.8■□□□□ 0.12
CXCR4P61073 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.8■□□□□ 0.12
CXCR4P61073 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CXCR4P61073 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CXCR4P61073 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.8■□□□□ 0.12
CXCR4P61073 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CXCR4P61073 KRT17P2-201ENST00000300992 1314 ntBASIC15.8■□□□□ 0.12
CXCR4P61073 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.8■□□□□ 0.12
CXCR4P61073 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.8■□□□□ 0.12
CXCR4P61073 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CXCR4P61073 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.8■□□□□ 0.12
CXCR4P61073 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.8■□□□□ 0.12
CXCR4P61073 NEK4P2-201ENST00000580004 1012 ntBASIC15.8■□□□□ 0.12
CXCR4P61073 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.8■□□□□ 0.12
CXCR4P61073 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.8■□□□□ 0.12
CXCR4P61073 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.8■□□□□ 0.12
CXCR4P61073 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.8■□□□□ 0.12
CXCR4P61073 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.8■□□□□ 0.12
CXCR4P61073 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CXCR4P61073 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.8■□□□□ 0.12
CXCR4P61073 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.8■□□□□ 0.12
CXCR4P61073 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms