Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TNFSF9P41273 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.71■□□□□ 0.59
TNFSF9P41273 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF9P41273 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF9P41273 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF9P41273 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF9P41273 AC093525.9-201ENST00000624961 1746 ntBASIC18.71■□□□□ 0.59
TNFSF9P41273 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFSF9P41273 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TNFSF9P41273 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFSF9P41273 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
TNFSF9P41273 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TNFSF9P41273 MIR574-201ENST00000385209 96 ntBASIC18.7■□□□□ 0.58
TNFSF9P41273 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.7■□□□□ 0.58
TNFSF9P41273 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TNFSF9P41273 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFSF9P41273 AC108073.2-201ENST00000464002 357 ntBASIC18.7■□□□□ 0.58
TNFSF9P41273 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 AC108751.1-201ENST00000490852 363 ntBASIC18.7■□□□□ 0.58
TNFSF9P41273 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TNFSF9P41273 IGHV3-65-201ENST00000523210 341 ntBASIC18.7■□□□□ 0.58
TNFSF9P41273 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFSF9P41273 AC008667.4-201ENST00000607370 168 ntBASIC18.7■□□□□ 0.58
TNFSF9P41273 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.7■□□□□ 0.58
TNFSF9P41273 PGM5P2-202ENST00000637225 1043 ntBASIC18.7■□□□□ 0.58
TNFSF9P41273 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TNFSF9P41273 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF9P41273 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TNFSF9P41273 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFSF9P41273 HTR7P1-202ENST00000624664 4411 ntBASIC18.69■□□□□ 0.58
TNFSF9P41273 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFSF9P41273 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFSF9P41273 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
TNFSF9P41273 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TNFSF9P41273 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.69■□□□□ 0.58
TNFSF9P41273 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFSF9P41273 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.69■□□□□ 0.58
TNFSF9P41273 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFSF9P41273 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.69■□□□□ 0.58
TNFSF9P41273 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFSF9P41273 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFSF9P41273 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFSF9P41273 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFSF9P41273 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TNFSF9P41273 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFSF9P41273 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.69■□□□□ 0.58
TNFSF9P41273 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF9P41273 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF9P41273 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFSF9P41273 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFSF9P41273 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF9P41273 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TNFSF9P41273 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF9P41273 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF9P41273 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TNFSF9P41273 AP002414.1-201ENST00000391405 1147 ntBASIC18.68■□□□□ 0.58
TNFSF9P41273 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.68■□□□□ 0.58
TNFSF9P41273 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF9P41273 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
TNFSF9P41273 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.68■□□□□ 0.58
TNFSF9P41273 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.68■□□□□ 0.58
TNFSF9P41273 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFSF9P41273 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TNFSF9P41273 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms