Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 FAM86GP-201ENST00000448322 971 ntBASIC19.46■□□□□ 0.71
COL11A1P12107 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.46■□□□□ 0.71
COL11A1P12107 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.46■□□□□ 0.71
COL11A1P12107 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.46■□□□□ 0.71
COL11A1P12107 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.46■□□□□ 0.71
COL11A1P12107 AC051619.7-201ENST00000568314 623 ntBASIC19.46■□□□□ 0.71
COL11A1P12107 MIR3197-201ENST00000582241 73 ntBASIC19.46■□□□□ 0.71
COL11A1P12107 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.46■□□□□ 0.71
COL11A1P12107 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
COL11A1P12107 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
COL11A1P12107 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 AC012569.1-201ENST00000591191 1524 ntBASIC19.46■□□□□ 0.71
COL11A1P12107 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COL11A1P12107 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
COL11A1P12107 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.46■□□□□ 0.71
COL11A1P12107 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.46■□□□□ 0.71
COL11A1P12107 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.46■□□□□ 0.71
COL11A1P12107 AC131009.4-201ENST00000624048 1740 ntBASIC19.46■□□□□ 0.71
COL11A1P12107 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.46■□□□□ 0.71
COL11A1P12107 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 AC067863.1-201ENST00000494933 530 ntBASIC19.46■□□□□ 0.71
COL11A1P12107 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.46■□□□□ 0.71
COL11A1P12107 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.46■□□□□ 0.71
COL11A1P12107 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.46■□□□□ 0.71
COL11A1P12107 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.46■□□□□ 0.71
COL11A1P12107 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
COL11A1P12107 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.46■□□□□ 0.71
COL11A1P12107 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL11A1P12107 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.46■□□□□ 0.7
COL11A1P12107 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.45■□□□□ 0.7
COL11A1P12107 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL11A1P12107 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.45■□□□□ 0.7
COL11A1P12107 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.45■□□□□ 0.7
COL11A1P12107 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
COL11A1P12107 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.45■□□□□ 0.7
COL11A1P12107 AC134043.2-201ENST00000624206 2238 ntBASIC19.45■□□□□ 0.7
COL11A1P12107 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL11A1P12107 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL11A1P12107 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL11A1P12107 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL11A1P12107 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.45■□□□□ 0.7
COL11A1P12107 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL11A1P12107 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.45■□□□□ 0.7
COL11A1P12107 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.45■□□□□ 0.7
COL11A1P12107 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COL11A1P12107 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.45■□□□□ 0.7
COL11A1P12107 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.45■□□□□ 0.7
COL11A1P12107 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.45■□□□□ 0.7
COL11A1P12107 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.45■□□□□ 0.7
COL11A1P12107 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.45■□□□□ 0.7
COL11A1P12107 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.44■□□□□ 0.7
COL11A1P12107 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.44■□□□□ 0.7
COL11A1P12107 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.44■□□□□ 0.7
COL11A1P12107 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
COL11A1P12107 BCRP1-201ENST00000444246 691 ntBASIC19.44■□□□□ 0.7
COL11A1P12107 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.44■□□□□ 0.7
COL11A1P12107 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.44■□□□□ 0.7
COL11A1P12107 AL390955.2-201ENST00000603032 514 ntBASIC19.44■□□□□ 0.7
COL11A1P12107 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.44■□□□□ 0.7
COL11A1P12107 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
COL11A1P12107 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
COL11A1P12107 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
COL11A1P12107 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.44■□□□□ 0.7
COL11A1P12107 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
COL11A1P12107 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 HCG4-201ENST00000418983 998 ntBASIC19.44■□□□□ 0.7
COL11A1P12107 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.44■□□□□ 0.7
COL11A1P12107 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.44■□□□□ 0.7
COL11A1P12107 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.44■□□□□ 0.7
COL11A1P12107 AL161645.1-201ENST00000622716 1255 ntBASIC19.44■□□□□ 0.7
COL11A1P12107 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL11A1P12107 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms