Protein–RNA interactions for Protein: P05783

KRT18, Keratin, type I cytoskeletal 18, humanhuman

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P05783 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT18P05783 TSPY19P-201ENST00000418461 509 ntBASIC19.41■□□□□ 0.7
KRT18P05783 TSPY18P-201ENST00000441642 509 ntBASIC19.41■□□□□ 0.7
KRT18P05783 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.41■□□□□ 0.7
KRT18P05783 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT18P05783 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT18P05783 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT18P05783 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.41■□□□□ 0.7
KRT18P05783 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
KRT18P05783 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT18P05783 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT18P05783 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT18P05783 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT18P05783 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT18P05783 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT18P05783 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT18P05783 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 PMPCAP1-201ENST00000508114 1576 ntBASIC19.4■□□□□ 0.7
KRT18P05783 AC009336.1-201ENST00000608941 1553 ntBASIC19.4■□□□□ 0.7
KRT18P05783 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT18P05783 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT18P05783 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
KRT18P05783 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.4■□□□□ 0.7
KRT18P05783 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
KRT18P05783 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
KRT18P05783 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT18P05783 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT18P05783 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT18P05783 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT18P05783 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.4■□□□□ 0.7
KRT18P05783 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
KRT18P05783 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.4■□□□□ 0.7
KRT18P05783 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.4■□□□□ 0.7
KRT18P05783 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
KRT18P05783 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 AC016396.2-201ENST00000562575 1417 ntBASIC19.4■□□□□ 0.7
KRT18P05783 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
KRT18P05783 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT18P05783 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
KRT18P05783 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT18P05783 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT18P05783 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.39■□□□□ 0.7
KRT18P05783 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.39■□□□□ 0.7
KRT18P05783 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT18P05783 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
KRT18P05783 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.39■□□□□ 0.7
KRT18P05783 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT18P05783 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
KRT18P05783 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT18P05783 AL645608.8-201ENST00000606034 2086 ntBASIC19.39■□□□□ 0.69
KRT18P05783 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT18P05783 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT18P05783 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
KRT18P05783 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT18P05783 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT18P05783 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT18P05783 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT18P05783 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT18P05783 AP001269.4-201ENST00000609611 512 ntBASIC19.39■□□□□ 0.69
KRT18P05783 AP000867.4-201ENST00000641616 219 ntBASIC19.39■□□□□ 0.69
KRT18P05783 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT18P05783 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT18P05783 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KRT18P05783 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT18P05783 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT18P05783 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT18P05783 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KRT18P05783 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT18P05783 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT18P05783 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT18P05783 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KRT18P05783 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT18P05783 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT18P05783 LTB4R2-202ENST00000528054 3092 ntBASIC19.38■□□□□ 0.69
KRT18P05783 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT18P05783 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KRT18P05783 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT18P05783 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms