Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-ND1P03886 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.4■□□□□ 0.22
MT-ND1P03886 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND1P03886 AL596275.1-201ENST00000423464 877 ntBASIC16.4■□□□□ 0.22
MT-ND1P03886 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MT-ND1P03886 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-ND1P03886 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-ND1P03886 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND1P03886 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MT-ND1P03886 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND1P03886 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MT-ND1P03886 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MT-ND1P03886 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MT-ND1P03886 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND1P03886 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MT-ND1P03886 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-ND1P03886 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND1P03886 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND1P03886 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
MT-ND1P03886 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.4■□□□□ 0.22
MT-ND1P03886 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.39■□□□□ 0.22
MT-ND1P03886 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.39■□□□□ 0.22
MT-ND1P03886 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
MT-ND1P03886 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.39■□□□□ 0.22
MT-ND1P03886 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-ND1P03886 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.39■□□□□ 0.21
MT-ND1P03886 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-ND1P03886 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.39■□□□□ 0.21
MT-ND1P03886 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
MT-ND1P03886 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 LINC01311-201ENST00000565162 1445 ntBASIC16.39■□□□□ 0.21
MT-ND1P03886 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MT-ND1P03886 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-ND1P03886 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-ND1P03886 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-ND1P03886 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-ND1P03886 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
MT-ND1P03886 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.39■□□□□ 0.21
MT-ND1P03886 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-ND1P03886 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-ND1P03886 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-ND1P03886 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.39■□□□□ 0.21
MT-ND1P03886 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-ND1P03886 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
MT-ND1P03886 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
MT-ND1P03886 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MT-ND1P03886 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND1P03886 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-ND1P03886 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
MT-ND1P03886 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-ND1P03886 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.38■□□□□ 0.21
MT-ND1P03886 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
MT-ND1P03886 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MT-ND1P03886 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-ND1P03886 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MT-ND1P03886 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 AC006449.5-201ENST00000610658 2098 ntBASIC16.38■□□□□ 0.21
MT-ND1P03886 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MT-ND1P03886 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-ND1P03886 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-ND1P03886 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
MT-ND1P03886 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.38■□□□□ 0.21
MT-ND1P03886 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.38■□□□□ 0.21
MT-ND1P03886 AL157888.1-201ENST00000631930 593 ntBASIC16.38■□□□□ 0.21
MT-ND1P03886 AC141257.4-201ENST00000634557 245 ntBASIC16.38■□□□□ 0.21
MT-ND1P03886 AC136944.6-201ENST00000634818 245 ntBASIC16.38■□□□□ 0.21
MT-ND1P03886 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MT-ND1P03886 LINC02012-201ENST00000608206 1725 ntBASIC16.38■□□□□ 0.21
MT-ND1P03886 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MT-ND1P03886 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND1P03886 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-ND1P03886 AL596257.1-201ENST00000641463 2694 ntBASIC16.38■□□□□ 0.21
MT-ND1P03886 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms