Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.98■□□□□ 0.15
NKX2-2O95096 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NKX2-2O95096 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.98■□□□□ 0.15
NKX2-2O95096 AC060834.1-201ENST00000443027 2032 ntBASIC15.98■□□□□ 0.15
NKX2-2O95096 SAPCD2P3-201ENST00000455031 850 ntBASIC15.98■□□□□ 0.15
NKX2-2O95096 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.98■□□□□ 0.15
NKX2-2O95096 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.98■□□□□ 0.15
NKX2-2O95096 IFNL4P1-201ENST00000607083 540 ntBASIC15.98■□□□□ 0.15
NKX2-2O95096 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
NKX2-2O95096 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NKX2-2O95096 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX2-2O95096 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NKX2-2O95096 AC092053.1-201ENST00000605787 1936 ntBASIC15.98■□□□□ 0.15
NKX2-2O95096 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.98■□□□□ 0.15
NKX2-2O95096 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NKX2-2O95096 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.97■□□□□ 0.15
NKX2-2O95096 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.97■□□□□ 0.15
NKX2-2O95096 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NKX2-2O95096 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.97■□□□□ 0.15
NKX2-2O95096 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.97■□□□□ 0.15
NKX2-2O95096 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NKX2-2O95096 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.97■□□□□ 0.15
NKX2-2O95096 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NKX2-2O95096 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.97■□□□□ 0.15
NKX2-2O95096 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.97■□□□□ 0.15
NKX2-2O95096 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.97■□□□□ 0.15
NKX2-2O95096 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NKX2-2O95096 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NKX2-2O95096 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NKX2-2O95096 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NKX2-2O95096 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.97■□□□□ 0.15
NKX2-2O95096 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.97■□□□□ 0.15
NKX2-2O95096 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX2-2O95096 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX2-2O95096 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX2-2O95096 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NKX2-2O95096 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NKX2-2O95096 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX2-2O95096 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
NKX2-2O95096 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX2-2O95096 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX2-2O95096 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX2-2O95096 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NKX2-2O95096 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.96■□□□□ 0.15
NKX2-2O95096 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.96■□□□□ 0.15
NKX2-2O95096 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX2-2O95096 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX2-2O95096 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.96■□□□□ 0.15
NKX2-2O95096 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
NKX2-2O95096 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.96■□□□□ 0.15
NKX2-2O95096 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NKX2-2O95096 AF238378.1-201ENST00000526806 358 ntBASIC15.96■□□□□ 0.15
NKX2-2O95096 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
NKX2-2O95096 SART3-203ENST00000546611 1184 ntBASIC15.96■□□□□ 0.15
NKX2-2O95096 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.96■□□□□ 0.15
NKX2-2O95096 AL353135.1-201ENST00000606729 504 ntBASIC15.96■□□□□ 0.15
NKX2-2O95096 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.96■□□□□ 0.15
NKX2-2O95096 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.96■□□□□ 0.15
NKX2-2O95096 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NKX2-2O95096 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NKX2-2O95096 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms