Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CDKL5O76039 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CDKL5O76039 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.15■□□□□ 0.82
CDKL5O76039 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.15■□□□□ 0.82
CDKL5O76039 AC132008.2-207ENST00000454517 770 ntBASIC20.15■□□□□ 0.82
CDKL5O76039 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.15■□□□□ 0.82
CDKL5O76039 PRELID1P1-202ENST00000567272 903 ntBASIC20.15■□□□□ 0.82
CDKL5O76039 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.15■□□□□ 0.82
CDKL5O76039 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.15■□□□□ 0.82
CDKL5O76039 AP005117.1-201ENST00000584346 1413 ntBASIC20.15■□□□□ 0.82
CDKL5O76039 EGFEM1P-202ENST00000431685 1563 ntBASIC20.15■□□□□ 0.82
CDKL5O76039 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.15■□□□□ 0.82
CDKL5O76039 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.15■□□□□ 0.82
CDKL5O76039 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
CDKL5O76039 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CDKL5O76039 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.15■□□□□ 0.82
CDKL5O76039 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDKL5O76039 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDKL5O76039 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDKL5O76039 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDKL5O76039 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDKL5O76039 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CDKL5O76039 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDKL5O76039 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDKL5O76039 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CDKL5O76039 AC148477.5-201ENST00000625164 1645 ntBASIC20.14■□□□□ 0.81
CDKL5O76039 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
CDKL5O76039 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDKL5O76039 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDKL5O76039 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDKL5O76039 RBM17P3-201ENST00000417687 1192 ntBASIC20.14■□□□□ 0.81
CDKL5O76039 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.14■□□□□ 0.81
CDKL5O76039 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDKL5O76039 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.14■□□□□ 0.81
CDKL5O76039 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
CDKL5O76039 AP001269.4-201ENST00000609611 512 ntBASIC20.14■□□□□ 0.81
CDKL5O76039 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDKL5O76039 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDKL5O76039 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDKL5O76039 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
CDKL5O76039 AC012313.1-201ENST00000593393 3059 ntBASIC20.14■□□□□ 0.81
CDKL5O76039 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CDKL5O76039 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDKL5O76039 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CDKL5O76039 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDKL5O76039 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDKL5O76039 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CDKL5O76039 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDKL5O76039 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.13■□□□□ 0.81
CDKL5O76039 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDKL5O76039 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDKL5O76039 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDKL5O76039 KRT18P31-201ENST00000506277 1292 ntBASIC20.13■□□□□ 0.81
CDKL5O76039 AC106795.1-205ENST00000512851 1056 ntBASIC20.13■□□□□ 0.81
CDKL5O76039 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.13■□□□□ 0.81
CDKL5O76039 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDKL5O76039 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CDKL5O76039 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDKL5O76039 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDKL5O76039 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CDKL5O76039 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDKL5O76039 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.13■□□□□ 0.81
CDKL5O76039 AC080080.1-201ENST00000625121 2420 ntBASIC20.13■□□□□ 0.81
CDKL5O76039 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.13■□□□□ 0.81
CDKL5O76039 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CDKL5O76039 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKL5O76039 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CDKL5O76039 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKL5O76039 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKL5O76039 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKL5O76039 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CDKL5O76039 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
CDKL5O76039 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.12■□□□□ 0.81
CDKL5O76039 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDKL5O76039 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKL5O76039 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDKL5O76039 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.12■□□□□ 0.81
CDKL5O76039 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.12■□□□□ 0.81
CDKL5O76039 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.12■□□□□ 0.81
CDKL5O76039 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDKL5O76039 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDKL5O76039 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.12■□□□□ 0.81
CDKL5O76039 ACTG1P4-201ENST00000425123 1122 ntBASIC20.12■□□□□ 0.81
CDKL5O76039 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.12■□□□□ 0.81
CDKL5O76039 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.12■□□□□ 0.81
CDKL5O76039 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms