Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN11O75508 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CLDN11O75508 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN11O75508 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN11O75508 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN11O75508 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN11O75508 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN11O75508 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN11O75508 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN11O75508 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN11O75508 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN11O75508 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN11O75508 AC009947.1-201ENST00000444350 727 ntBASIC17.67■□□□□ 0.42
CLDN11O75508 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN11O75508 AC108751.1-201ENST00000490852 363 ntBASIC17.67■□□□□ 0.42
CLDN11O75508 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN11O75508 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN11O75508 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN11O75508 TERC-201ENST00000602385 541 ntBASIC17.67■□□□□ 0.42
CLDN11O75508 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLDN11O75508 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLDN11O75508 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLDN11O75508 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN11O75508 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN11O75508 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN11O75508 AC116353.5-201ENST00000638148 1699 ntBASIC17.67■□□□□ 0.42
CLDN11O75508 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN11O75508 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN11O75508 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLDN11O75508 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN11O75508 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
CLDN11O75508 AC093525.9-201ENST00000624961 1746 ntBASIC17.67■□□□□ 0.42
CLDN11O75508 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLDN11O75508 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLDN11O75508 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN11O75508 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN11O75508 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN11O75508 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CLDN11O75508 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CLDN11O75508 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLDN11O75508 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN11O75508 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 AP000347.1-202ENST00000435868 847 ntBASIC17.66■□□□□ 0.42
CLDN11O75508 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN11O75508 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLDN11O75508 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN11O75508 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN11O75508 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN11O75508 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN11O75508 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN11O75508 CROCCP2-202ENST00000412962 2773 ntBASIC17.65■□□□□ 0.42
CLDN11O75508 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN11O75508 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN11O75508 PI4KAP1-204ENST00000612579 1703 ntBASIC17.65■□□□□ 0.42
CLDN11O75508 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN11O75508 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN11O75508 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN11O75508 AC034105.1-201ENST00000563488 319 ntBASIC17.65■□□□□ 0.42
CLDN11O75508 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN11O75508 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.65■□□□□ 0.42
CLDN11O75508 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN11O75508 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN11O75508 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN11O75508 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLDN11O75508 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN11O75508 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
CLDN11O75508 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN11O75508 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLDN11O75508 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN11O75508 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLDN11O75508 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN11O75508 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN11O75508 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
CLDN11O75508 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN11O75508 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN11O75508 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN11O75508 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN11O75508 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN11O75508 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN11O75508 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN11O75508 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN11O75508 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLDN11O75508 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLDN11O75508 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN11O75508 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN11O75508 AC108073.2-201ENST00000464002 357 ntBASIC17.64■□□□□ 0.41
CLDN11O75508 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms