Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE3O75131 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 AP002414.3-201ENST00000589352 1468 ntBASIC16.67■□□□□ 0.26
CPNE3O75131 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE3O75131 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CPNE3O75131 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.67■□□□□ 0.26
CPNE3O75131 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE3O75131 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CPNE3O75131 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE3O75131 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CPNE3O75131 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE3O75131 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CPNE3O75131 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE3O75131 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CPNE3O75131 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CPNE3O75131 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CPNE3O75131 KLF4P1-201ENST00000412782 1185 ntBASIC16.66■□□□□ 0.26
CPNE3O75131 MED15P5-201ENST00000423150 992 ntBASIC16.66■□□□□ 0.26
CPNE3O75131 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CPNE3O75131 AL591424.1-201ENST00000442569 1213 ntBASIC16.66■□□□□ 0.26
CPNE3O75131 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE3O75131 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE3O75131 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE3O75131 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE3O75131 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.66■□□□□ 0.26
CPNE3O75131 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CPNE3O75131 AL049757.1-201ENST00000616842 1596 ntBASIC16.66■□□□□ 0.26
CPNE3O75131 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE3O75131 PGM5P2-202ENST00000637225 1043 ntBASIC16.66■□□□□ 0.26
CPNE3O75131 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE3O75131 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE3O75131 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.66■□□□□ 0.26
CPNE3O75131 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE3O75131 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE3O75131 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE3O75131 AC100803.2-201ENST00000562459 1963 ntBASIC16.66■□□□□ 0.26
CPNE3O75131 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CPNE3O75131 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE3O75131 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE3O75131 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE3O75131 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE3O75131 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE3O75131 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE3O75131 AC141586.5-201ENST00000624546 2050 ntBASIC16.65■□□□□ 0.26
CPNE3O75131 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE3O75131 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE3O75131 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE3O75131 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE3O75131 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE3O75131 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE3O75131 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.65■□□□□ 0.26
CPNE3O75131 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.65■□□□□ 0.26
CPNE3O75131 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.65■□□□□ 0.26
CPNE3O75131 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE3O75131 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CPNE3O75131 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.65■□□□□ 0.26
CPNE3O75131 AC034105.1-201ENST00000563488 319 ntBASIC16.65■□□□□ 0.26
CPNE3O75131 AL356488.2-201ENST00000602755 427 ntBASIC16.65■□□□□ 0.26
CPNE3O75131 AC004817.3-201ENST00000602957 2129 ntBASIC16.65■□□□□ 0.26
CPNE3O75131 REXO1L9P-201ENST00000604264 2108 ntBASIC16.65■□□□□ 0.26
CPNE3O75131 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CPNE3O75131 FAM197Y3-203ENST00000618346 717 ntBASIC16.65■□□□□ 0.26
CPNE3O75131 AL589182.2-201ENST00000619332 1049 ntBASIC16.65■□□□□ 0.26
CPNE3O75131 AC005593.1-201ENST00000624894 515 ntBASIC16.65■□□□□ 0.26
CPNE3O75131 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CPNE3O75131 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CPNE3O75131 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
CPNE3O75131 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE3O75131 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE3O75131 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CPNE3O75131 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE3O75131 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CPNE3O75131 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms