Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
ACTN4O43707 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ACTN4O43707 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ACTN4O43707 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.44■□□□□ 0.7
ACTN4O43707 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 KLF4P1-201ENST00000412782 1185 ntBASIC19.44■□□□□ 0.7
ACTN4O43707 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.44■□□□□ 0.7
ACTN4O43707 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 AC124947.2-201ENST00000547118 1133 ntBASIC19.44■□□□□ 0.7
ACTN4O43707 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ACTN4O43707 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ACTN4O43707 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.44■□□□□ 0.7
ACTN4O43707 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.44■□□□□ 0.7
ACTN4O43707 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.44■□□□□ 0.7
ACTN4O43707 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.44■□□□□ 0.7
ACTN4O43707 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ACTN4O43707 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ACTN4O43707 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ACTN4O43707 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ACTN4O43707 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ACTN4O43707 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.43■□□□□ 0.7
ACTN4O43707 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.43■□□□□ 0.7
ACTN4O43707 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.43■□□□□ 0.7
ACTN4O43707 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
ACTN4O43707 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ACTN4O43707 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.43■□□□□ 0.7
ACTN4O43707 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
ACTN4O43707 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.43■□□□□ 0.7
ACTN4O43707 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.43■□□□□ 0.7
ACTN4O43707 LINC00265-3P-201ENST00000447588 903 ntBASIC19.43■□□□□ 0.7
ACTN4O43707 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.43■□□□□ 0.7
ACTN4O43707 AC096582.2-201ENST00000510860 516 ntBASIC19.43■□□□□ 0.7
ACTN4O43707 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.43■□□□□ 0.7
ACTN4O43707 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.43■□□□□ 0.7
ACTN4O43707 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.43■□□□□ 0.7
ACTN4O43707 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.43■□□□□ 0.7
ACTN4O43707 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.43■□□□□ 0.7
ACTN4O43707 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 PMPCAP1-201ENST00000508114 1576 ntBASIC19.43■□□□□ 0.7
ACTN4O43707 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.43■□□□□ 0.7
ACTN4O43707 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
ACTN4O43707 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ACTN4O43707 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ACTN4O43707 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.43■□□□□ 0.7
ACTN4O43707 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ACTN4O43707 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ACTN4O43707 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACTN4O43707 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACTN4O43707 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ACTN4O43707 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.42■□□□□ 0.7
ACTN4O43707 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ACTN4O43707 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
ACTN4O43707 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACTN4O43707 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.42■□□□□ 0.7
ACTN4O43707 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ACTN4O43707 RNF216P1-203ENST00000404404 2427 ntBASIC19.42■□□□□ 0.7
ACTN4O43707 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.42■□□□□ 0.7
ACTN4O43707 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ACTN4O43707 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ACTN4O43707 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ACTN4O43707 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.42■□□□□ 0.7
ACTN4O43707 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.42■□□□□ 0.7
ACTN4O43707 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.42■□□□□ 0.7
ACTN4O43707 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.42■□□□□ 0.7
ACTN4O43707 MINOS1P3-201ENST00000457048 203 ntBASIC19.42■□□□□ 0.7
ACTN4O43707 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.42■□□□□ 0.7
ACTN4O43707 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.42■□□□□ 0.7
ACTN4O43707 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.42■□□□□ 0.7
ACTN4O43707 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ACTN4O43707 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.42■□□□□ 0.7
ACTN4O43707 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
ACTN4O43707 AP000550.4-202ENST00000639755 178 ntBASIC19.42■□□□□ 0.7
ACTN4O43707 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms