Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 EGFEM1P-202ENST00000431685 1563 ntBASIC15.11■□□□□ 0.01
SHISA3A0PJX4 AC010460.3-201ENST00000511359 1579 ntBASIC15.11■□□□□ 0.01
SHISA3A0PJX4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 AC023824.1-201ENST00000562945 2975 ntBASIC15.11■□□□□ 0.01
SHISA3A0PJX4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 AC096633.1-201ENST00000422446 749 ntBASIC15.11■□□□□ 0.01
SHISA3A0PJX4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHISA3A0PJX4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 TSPY14P-201ENST00000303979 915 ntBASIC15.1■□□□□ 0.01
SHISA3A0PJX4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 AP006294.2-201ENST00000641667 209 ntBASIC15.1■□□□□ 0.01
SHISA3A0PJX4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 AC068418.2-201ENST00000577309 3703 ntBASIC15.1■□□□□ 0.01
SHISA3A0PJX4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHISA3A0PJX4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHISA3A0PJX4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHISA3A0PJX4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHISA3A0PJX4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHISA3A0PJX4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SHISA3A0PJX4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHISA3A0PJX4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHISA3A0PJX4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms