Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 RCN1P2-201ENST00000398357 915 ntBASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 KLF4P1-201ENST00000412782 1185 ntBASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 AC074051.2-201ENST00000565115 352 ntBASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 AC073592.5-201ENST00000624854 528 ntBASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 AC099398.1-201ENST00000567919 2776 ntBASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 AC069148.1-201ENST00000608741 768 ntBASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 NPAP1P7-201ENST00000613027 823 ntBASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CYP46A1Q9Y6A2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.58■□□□□ 0.88
CYP46A1Q9Y6A2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CYP46A1Q9Y6A2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.58■□□□□ 0.88
CYP46A1Q9Y6A2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CYP46A1Q9Y6A2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CYP46A1Q9Y6A2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CYP46A1Q9Y6A2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CYP46A1Q9Y6A2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CYP46A1Q9Y6A2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.58■□□□□ 0.88
CYP46A1Q9Y6A2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CYP46A1Q9Y6A2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CYP46A1Q9Y6A2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 AP000867.3-201ENST00000524675 377 ntBASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 AC106886.4-201ENST00000623557 2502 ntBASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CYP46A1Q9Y6A2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CYP46A1Q9Y6A2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms