Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
LINC00588Q9Y4M8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC00588Q9Y4M8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC00588Q9Y4M8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC00588Q9Y4M8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC00588Q9Y4M8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
LINC00588Q9Y4M8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC00588Q9Y4M8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
LINC00588Q9Y4M8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC11.88□□□□□ -0.51
LINC00588Q9Y4M8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC00588Q9Y4M8 AC008764.6-201ENST00000595909 2069 ntBASIC11.88□□□□□ -0.51
LINC00588Q9Y4M8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC00588Q9Y4M8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LINC00588Q9Y4M8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 AC133963.1-201ENST00000504166 1679 ntBASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 AP002414.1-201ENST00000391405 1147 ntBASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 AC040169.1-201ENST00000565382 521 ntBASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
LINC00588Q9Y4M8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 AL590787.1-201ENST00000568856 1315 ntBASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 PI4KAP1-204ENST00000612579 1703 ntBASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 MRPL20P1-201ENST00000400819 433 ntBASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 PRSS29P-201ENST00000440800 595 ntBASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 VN2R19P-201ENST00000442399 1052 ntBASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 AC006538.3-201ENST00000612495 578 ntBASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 GGTLC5P-201ENST00000617623 998 ntBASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms