Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIP2Q9UDT6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 AC008735.5-201ENST00000623544 497 ntBASIC20.58■□□□□ 0.89
CLIP2Q9UDT6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLIP2Q9UDT6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLIP2Q9UDT6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.58■□□□□ 0.88
CLIP2Q9UDT6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.58■□□□□ 0.88
CLIP2Q9UDT6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 AC148477.5-201ENST00000625164 1645 ntBASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 MIR574-201ENST00000385209 96 ntBASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 AC106730.1-201ENST00000566722 1090 ntBASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CLIP2Q9UDT6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 AP002414.3-201ENST00000589352 1468 ntBASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 IGHV3-22-201ENST00000520721 359 ntBASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 AC105339.3-201ENST00000560043 636 ntBASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
CLIP2Q9UDT6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 IGHV3-52-201ENST00000519770 353 ntBASIC20.55■□□□□ 0.88
CLIP2Q9UDT6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms