Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM38AQ9H6F2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TMEM38AQ9H6F2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.14■□□□□ 0.18
TMEM38AQ9H6F2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.14■□□□□ 0.18
TMEM38AQ9H6F2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TMEM38AQ9H6F2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.18
TMEM38AQ9H6F2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
TMEM38AQ9H6F2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 STK19B-204ENST00000512515 211 ntBASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 RNF216P1-203ENST00000404404 2427 ntBASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM38AQ9H6F2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 AL603756.1-201ENST00000606511 2163 ntBASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 AC003669.1-201ENST00000334569 611 ntBASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
TMEM38AQ9H6F2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 GPR89P-201ENST00000407924 1495 ntBASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 DUX4L26-201ENST00000489078 1255 ntBASIC16.12■□□□□ 0.17
TMEM38AQ9H6F2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms