Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.63■□□□□ 0.25
PIF1Q9H611 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.62■□□□□ 0.25
PIF1Q9H611 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.62■□□□□ 0.25
PIF1Q9H611 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PIF1Q9H611 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PIF1Q9H611 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PIF1Q9H611 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PIF1Q9H611 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.62■□□□□ 0.25
PIF1Q9H611 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
PIF1Q9H611 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PIF1Q9H611 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PIF1Q9H611 AC092171.3-201ENST00000610122 2651 ntBASIC16.62■□□□□ 0.25
PIF1Q9H611 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 AC211429.1-201ENST00000415277 523 ntBASIC16.62■□□□□ 0.25
PIF1Q9H611 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.62■□□□□ 0.25
PIF1Q9H611 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.62■□□□□ 0.25
PIF1Q9H611 AC005363.2-201ENST00000618631 242 ntBASIC16.62■□□□□ 0.25
PIF1Q9H611 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PIF1Q9H611 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.62■□□□□ 0.25
PIF1Q9H611 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PIF1Q9H611 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.62■□□□□ 0.25
PIF1Q9H611 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.62■□□□□ 0.25
PIF1Q9H611 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PIF1Q9H611 AC016396.2-201ENST00000562575 1417 ntBASIC16.62■□□□□ 0.25
PIF1Q9H611 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.62■□□□□ 0.25
PIF1Q9H611 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.61■□□□□ 0.25
PIF1Q9H611 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PIF1Q9H611 AC046185.3-201ENST00000623228 1824 ntBASIC16.61■□□□□ 0.25
PIF1Q9H611 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.61■□□□□ 0.25
PIF1Q9H611 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PIF1Q9H611 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 AC046158.3-201ENST00000624947 2558 ntBASIC16.61■□□□□ 0.25
PIF1Q9H611 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.61■□□□□ 0.25
PIF1Q9H611 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PIF1Q9H611 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
PIF1Q9H611 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 GCSHP2-201ENST00000560971 527 ntBASIC16.61■□□□□ 0.25
PIF1Q9H611 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PIF1Q9H611 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
PIF1Q9H611 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PIF1Q9H611 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PIF1Q9H611 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PIF1Q9H611 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PIF1Q9H611 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
PIF1Q9H611 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.61■□□□□ 0.25
PIF1Q9H611 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 AC092053.1-201ENST00000605787 1936 ntBASIC16.6■□□□□ 0.25
PIF1Q9H611 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PIF1Q9H611 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 BX276092.7-203ENST00000637198 1536 ntBASIC16.6■□□□□ 0.25
PIF1Q9H611 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.6■□□□□ 0.25
PIF1Q9H611 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.6■□□□□ 0.25
PIF1Q9H611 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PIF1Q9H611 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 AC116353.5-201ENST00000638148 1699 ntBASIC16.6■□□□□ 0.25
PIF1Q9H611 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.6■□□□□ 0.25
PIF1Q9H611 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 AC113347.1-201ENST00000413321 391 ntBASIC16.6■□□□□ 0.25
PIF1Q9H611 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms