Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 AL355355.2-201ENST00000442321 338 ntBASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLIRPQ9GZT3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 AL391256.1-201ENST00000443260 1855 ntBASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.27■□□□□ 0.03
SLIRPQ9GZT3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 AL603832.2-201ENST00000566195 2125 ntBASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 MTDHP1-201ENST00000605323 784 ntBASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.26■□□□□ 0.03
SLIRPQ9GZT3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms