Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 STARP1-201ENST00000397973 869 ntBASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 SPDYE15P-201ENST00000424157 909 ntBASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 AC005104.2-201ENST00000427818 678 ntBASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 AC105020.1-201ENST00000435356 2205 ntBASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 AL391807.1-203ENST00000604392 2365 ntBASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 KRT18P48-201ENST00000434763 852 ntBASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 AC079602.3-201ENST00000623931 403 ntBASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 AC116353.5-201ENST00000638148 1699 ntBASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
THUMPD3Q9BV44 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 TMPOP1-202ENST00000424642 1267 ntBASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 HOMER2P1-201ENST00000455653 964 ntBASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 KRT18P21-201ENST00000515767 1272 ntBASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 AL136038.4-201ENST00000603606 1261 ntBASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
THUMPD3Q9BV44 PCDHB19P-201ENST00000570871 2371 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms